Acipenser ruthenus

sterlet


Information

Resource
NCBI Taxonomy Browser NCBI:txid7906

Resource Maternal Assembly Paternal Assembly
GenBank GCA_902713425.1 GCA_902713435.1
ENA GCA_902713425.1 GCA_902713435.1
UCSC Genome Browser GCA_902713425.1 GCA_902713435.1
CC BY 2.0 Tauralbus (flickr)

Raw Data

Datatype Approximate Coverage Download Size
10xN/A158.814 GB
BionanoN/A2.769 GB
Dovetail GenomicsN/A160.485 GB
IlluminaN/A136.869 GB
PacBio SubReadsN/A636.692 GB
PacBio HiFiN/A74.553 GB
No genome size estimate available.
Last upload on 14 August 2020.
Download each datatype using the AWS Command Line Interface:

Assemblies

Individual 3 Primary Assembly
No primary assembly available.

Individual 3 Alternate Assembly
No alternate assembly available.

Individual 3 Mitochondrial Assembly
Version assembly_MT_rockefeller from 2 October 2019
fAciRut3.MT.20191002.fasta.gz (5 KB)

Individual 3 Maternal Assembly
Version assembly_curated from 4 December 2019
fAciRut3.mat.cur.20191204.fasta.gz (467 MB)

Contigs Scaffolds
NG LG Len LG Len
10 5 22.50 Mbp 1 105.01 Mbp
20 13 20.03 Mbp 3 87.32 Mbp
30 22 15.87 Mbp 4 87.19 Mbp
40 33 12.96 Mbp 7 59.37 Mbp
50 47 10.83 Mbp 10 43.12 Mbp
60 64 8.19 Mbp 14 35.49 Mbp
70 89 5.35 Mbp 19 29.75 Mbp
80 129 3.24 Mbp 25 26.79 Mbp
90 199 1.58 Mbp 36 9.03 Mbp
100 646 5.93 Kbp 244 14.14 Kbp
1.000x 647 1.64 Gbp 245 1.64 Gbp
Individual 3 Paternal Assembly
Version assembly_curated from 4 December 2019
fAciRut3.pat.cur.20191204.fasta.gz (473 MB)

Contigs Scaffolds
NG LG Len LG Len
10 5 26.11 Mbp 1 104.95 Mbp
20 12 21.82 Mbp 3 88.35 Mbp
30 21 16.55 Mbp 5 83.15 Mbp
40 31 14.23 Mbp 7 59.13 Mbp
50 44 11.50 Mbp 10 42.54 Mbp
60 60 8.85 Mbp 15 33.22 Mbp
70 83 5.60 Mbp 20 30.48 Mbp
80 121 3.34 Mbp 26 22.95 Mbp
90 197 1.43 Mbp 37 10.71 Mbp
100 645 851 bp 223 16.39 Kbp
1.000x 646 1.66 Gbp 224 1.66 Gbp
NG based on each assembly size.
(No genome size estimate available.)

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.