Melanotaenia boesemani

Boeseman's rainbowfish


Information

Resource
NCBI Taxonomy Browser NCBI:txid1250792

Raw Data

Datatype Approximate Coverage Download Size
10xN/A59.239 GB
ArimaN/A52.028 GB
BionanoN/A1.459 GB
PacBio SubReadsN/A107.420 GB
No genome size estimate available.
Last upload on 26 October 2020.
Download each datatype using the AWS Command Line Interface:
aws s3 --no-sign-request sync s3://genomeark/species/Melanotaenia_boesemani/fMelBoe1/genomic_data/10x/ .
aws s3 --no-sign-request sync s3://genomeark/species/Melanotaenia_boesemani/fMelBoe1/genomic_data/arima/ .
aws s3 --no-sign-request sync s3://genomeark/species/Melanotaenia_boesemani/fMelBoe1/genomic_data/bionano/ .
aws s3 --no-sign-request sync s3://genomeark/species/Melanotaenia_boesemani/fMelBoe1/genomic_data/pacbio/ . --exclude "*ccs*bam*"

Assemblies

Individual 1 Primary Assembly
Version assembly_curated from 12 March 2021
fMelBoe1.pri.cur.20210312.fasta.gz (248 MB)

Contigs Scaffolds
NG LG Len LG Len
10 3 22.44 Mbp 2 41.08 Mbp
20 7 18.58 Mbp 4 39.49 Mbp
30 13 14.01 Mbp 6 39.29 Mbp
40 19 12.20 Mbp 8 38.00 Mbp
50 27 9.30 Mbp 10 37.88 Mbp
60 40 5.51 Mbp 13 35.46 Mbp
70 59 3.87 Mbp 15 34.71 Mbp
80 88 2.36 Mbp 18 31.82 Mbp
90 140 1.13 Mbp 20 30.54 Mbp
100 531 165 bp 91 874 bp
1.000x 532 0.86 Gbp 92 0.87 Gbp
Individual 1 Alternate Assembly
Version assembly_curated from 12 March 2021
fMelBoe1.alt.cur.20210312.fasta.gz (221 MB)

Contigs Scaffolds
NG LG Len LG Len
10 46 1.28 Mbp 45 1.31 Mbp
20 117 0.91 Mbp 115 0.93 Mbp
30 212 0.71 Mbp 209 0.72 Mbp
40 334 0.55 Mbp 331 0.55 Mbp
50 496 0.41 Mbp 492 0.41 Mbp
60 712 0.31 Mbp 708 0.31 Mbp
70 1000 0.23 Mbp 994 0.23 Mbp
80 1395 0.16 Mbp 1387 0.16 Mbp
90 1966 0.11 Mbp 1952 0.11 Mbp
100 3238 420 bp 3193 485 bp
1.000x 3239 0.76 Gbp 3194 0.76 Gbp
NG based on each assembly size.
(No genome size estimate available.)
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 2 October 2019
fMelBoe1.MT.20191002.fasta.gz (5 KB)

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