Rattus norvegicus

Norway rat


Information

Resource
NCBI Taxonomy Browser NCBI:txid10116

CC BY-SA 2.0, Jean-Jacques Boujot (flickr)

Raw Data

Datatype Approximate Coverage Download Size
10xN/A130.223 GB
ArimaN/A155.028 GB
BionanoN/A1.419 GB
PacBio SubReadsN/A470.087 GB
No genome size estimate available.
Last upload on 2 February 2020.
Download each datatype using the AWS Command Line Interface:

Assemblies

Individual 1 Primary Assembly
Version assembly_curated from 11 September 2020
mRatNor1.pri.cur.20200911.fasta.gz (770 MB)

Contigs Scaffolds
NG LG Len LG Len
10 3 66.39 Mbp 1 249.05 Mbp
20 7 60.87 Mbp 2 182.69 Mbp
30 12 47.24 Mbp 3 169.03 Mbp
40 17 39.90 Mbp 5 152.45 Mbp
50 26 29.20 Mbp 7 135.01 Mbp
60 35 23.71 Mbp 9 114.18 Mbp
70 49 16.15 Mbp 11 106.81 Mbp
80 71 9.60 Mbp 14 86.53 Mbp
90 114 3.78 Mbp 17 83.83 Mbp
100 755 136 bp 174 746 bp
1.000x 756 2.63 Gbp 175 2.65 Gbp
Individual 1 Alternate Assembly
Version assembly_curated from 11 September 2020
mRatNor1.alt.cur.20200911.fasta.gz (84 MB)

Contigs Scaffolds
NG LG Len LG Len
10 139 0.15 Mbp 139 0.15 Mbp
20 347 0.13 Mbp 347 0.13 Mbp
30 584 0.12 Mbp 583 0.12 Mbp
40 840 0.11 Mbp 840 0.11 Mbp
50 1117 0.10 Mbp 1116 0.10 Mbp
60 1413 93.70 Kbp 1412 93.71 Kbp
70 1731 86.65 Kbp 1731 86.67 Kbp
80 2081 77.15 Kbp 2080 77.20 Kbp
90 2485 64.17 Kbp 2483 64.31 Kbp
100 3161 1.52 Kbp 3155 1.52 Kbp
1.000x 3162 286.93 Mbp 3156 286.93 Mbp
NG based on each assembly size.
(No genome size estimate available.)
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 4 December 2019
mRatNor1.MT.20191204.fasta.gz (5 KB)

Data Use Policy

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