Sebastes umbrosus

honeycomb rockfish


Information

Resource
NCBI Taxonomy Browser NCBI:txid72105

No image

Raw Data

Datatype Approximate Coverage Download Size
10x53.86x26.956 GB
Bionano1114.12x1.911 GB
Illumina41.78x18.543 GB
PacBio SubReads45.05x76.821 GB
Coverage based on genome size 1.00 Gbp.
Last upload on 26 November 2019.
Download each datatype using the AWS Command Line Interface:

Assemblies

Individual 1 Primary Assembly
Version assembly_curated from 7 September 2020
fSebUmb1.pri.cur.20200907.fasta.gz (229 MB)

Contigs Scaffolds
NG LG Len LG Len
10 4 20.90 Mbp 2 41.17 Mbp
20 9 18.80 Mbp 4 38.61 Mbp
30 15 15.67 Mbp 7 36.01 Mbp
40 23 11.45 Mbp 10 34.91 Mbp
50 33 8.30 Mbp 13 32.63 Mbp
60 47 5.85 Mbp 16 30.65 Mbp
70 69 3.49 Mbp 20 27.31 Mbp
80 - - 105 39.23 Kbp
90 - - - -
100 - - - -
0.800x 353 0.80 Gbp 138 0.80 Gbp
Individual 1 Alternate Assembly
Version assembly_curated from 7 September 2020
fSebUmb1.alt.cur.20200907.fasta.gz (221 MB)

Contigs Scaffolds
NG LG Len LG Len
10 51 1.44 Mbp 51 1.44 Mbp
20 136 0.97 Mbp 136 0.97 Mbp
30 252 0.74 Mbp 252 0.74 Mbp
40 414 0.54 Mbp 413 0.54 Mbp
50 626 0.40 Mbp 624 0.41 Mbp
60 920 0.28 Mbp 915 0.28 Mbp
70 1392 0.16 Mbp 1384 0.16 Mbp
80 - - - -
90 - - - -
100 - - - -
0.766x 2152 0.77 Gbp 2131 0.77 Gbp
NG based on genome size 1.00 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 3 December 2019
fSebUmb1.MT.20191203.fasta.gz (5 KB)

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.