Trichosurus vulpecula

common brushtail possum


Information

Resource
NCBI Taxonomy Browser NCBI:txid9337

Resource Primary Assembly Alternate Assembly
GenBank GCA_011100635.1 GCA_011100645.1
ENA GCA_011100635.1 GCA_011100645.1
UCSC Genome Browser GCA_011100635.1 GCA_011100645.1

CC BY 2.0 Donald Hobern (flickr)

Raw Data

Datatype Approximate Coverage Download Size
10x80.72x115.568 GB
Arima148.36x227.757 GB
Bionano197.07x1.178 GB
PacBio SubReads60.73x315.605 GB
Coverage based on genome size 3.00 Gbp.
Last upload on 17 May 2019.
Download each datatype using the AWS Command Line Interface:

Assemblies

Individual 1 Primary Assembly
Version assembly_curated from 15 January 2020
mTriVul1.pri.cur.20200115.fasta.gz (972 MB)

Contigs Scaffolds
NG LG Len LG Len
10 15 13.76 Mbp 0 0.57 Gbp
20 41 9.81 Mbp 1 463.07 Mbp
30 76 7.41 Mbp 1 463.07 Mbp
40 122 5.81 Mbp 2 445.41 Mbp
50 179 4.82 Mbp 3 442.56 Mbp
60 248 4.01 Mbp 3 442.56 Mbp
70 332 3.13 Mbp 4 310.11 Mbp
80 447 2.22 Mbp 5 285.15 Mbp
90 605 1.59 Mbp 6 275.47 Mbp
100 849 0.94 Mbp 7 267.64 Mbp
1.114x 2007 3.34 Gbp 211 3.36 Gbp
Individual 1 Alternate Assembly
Version assembly_curated from 15 January 2020
mTriVul1.alt.cur.20200115.fasta.gz (757 MB)

Contigs Scaffolds
NG LG Len LG Len
10 142 1.56 Mbp 142 1.56 Mbp
20 381 1.06 Mbp 381 1.06 Mbp
30 709 0.80 Mbp 709 0.80 Mbp
40 1143 0.60 Mbp 1143 0.60 Mbp
50 1722 0.44 Mbp 1722 0.44 Mbp
60 2552 0.30 Mbp 2552 0.30 Mbp
70 3898 0.16 Mbp 3897 0.16 Mbp
80 6931 62.47 Kbp 6895 63.50 Kbp
90 - - - -
100 - - - -
0.864x 12446 2.59 Gbp 12133 2.59 Gbp
NG based on genome size 3.00 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 4 October 2019
mTriVul1.MT.20191004.fasta.gz (5 KB)

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.