Bufo bufo

common toad


Information

Resource
NCBI Taxonomy Browser NCBI:txid8384

CC BY-SA 2.0 Rolf Dietrich Brecher (flickr)

Raw Data

Datatype Approximate Coverage Download Size
10xN/A343.284 GB
ArimaN/A335.631 GB
BionanoN/A3.695 GB
PacBio SubReadsN/A648.243 GB
No genome size estimate available.
Last upload on 16 March 2020.
Download each datatype using the AWS Command Line Interface:

Assemblies

Individual 1 Primary Assembly
Version assembly_cambridge from 29 May 2020
aBufBuf1.pri.asm.20200529.fasta.gz (1 GB)

Contigs Scaffolds
NG LG Len LG Len
10 33 11.71 Mbp 0 0.89 Gbp
20 86 8.27 Mbp 1 0.84 Gbp
30 156 6.45 Mbp 1 0.84 Gbp
40 246 4.98 Mbp 2 0.83 Gbp
50 361 3.88 Mbp 3 0.67 Gbp
60 512 2.93 Mbp 3 0.67 Gbp
70 718 2.12 Mbp 4 0.56 Gbp
80 1009 1.41 Mbp 5 430.64 Mbp
90 1551 0.61 Mbp 7 230.53 Mbp
100 6063 2 bp 2587 472 bp
1.000x 6064 5.13 Gbp 2588 5.17 Gbp
Individual 1 Alternate Assembly
Version assembly_cambridge from 29 May 2020
aBufBuf1.alt.asm.20200529.fasta.gz (1 GB)

Contigs Scaffolds
NG LG Len LG Len
10 319 0.76 Mbp 319 0.76 Mbp
20 926 0.51 Mbp 926 0.51 Mbp
30 1739 0.40 Mbp 1739 0.40 Mbp
40 2780 0.31 Mbp 2780 0.31 Mbp
50 4113 0.24 Mbp 4113 0.24 Mbp
60 5817 0.19 Mbp 5817 0.19 Mbp
70 8053 0.14 Mbp 8053 0.14 Mbp
80 11104 0.10 Mbp 11104 0.10 Mbp
90 15531 67.65 Kbp 15531 67.65 Kbp
100 23681 221 bp 23681 221 bp
1.000x 23682 3.65 Gbp 23682 3.65 Gbp
NG based on each assembly size.
(No genome size estimate available.)
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 5 October 2019
aBufBuf1.MT.20191005.fasta.gz (5 KB)

Data Use Policy

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