Melopsittacus undulatus

budgerigar


Information

NCBI Taxonomy Browser
CC BY-SA 3.0 Atlanta Zoo (wikimedia)

Raw Data

Datatype Approximate Coverage Download Size
10x79.30x50.530 GB
Arima83.65x53.244 GB
Bionano402.68x0.991 GB
Illumina310.57x191.222 GB
PacBio ScrapsN/A116.337 GB
PacBio SubReads61.11x129.896 GB
Coverage based on genome size 1.23 Gbp.
Last upload on 30 August 2019.
Download each datatype using the AWS Command Line Interface:

Assemblies


Individual 1 Primary Assembly
No primary assembly available.

Individual 1 Alternate Assembly
No alternate assembly available.

Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 20 August 2019
bMelUnd1.MT.20190820.fasta.gz (5 KB)

Individual 1 Maternal Assembly
Version assembly_rockefeller_trio_1.6 from 30 August 2019
bMelUnd1.mat.asm.20190830.fasta.gz (293 MB)

Contigs Scaffolds
NG LG Len LG Len
10 2 46.70 Mbp 1 113.31 Mbp
20 5 37.80 Mbp 2 88.75 Mbp
30 8 36.32 Mbp 3 87.39 Mbp
40 13 17.90 Mbp 4 86.63 Mbp
50 21 12.55 Mbp 6 75.85 Mbp
60 34 7.39 Mbp 8 57.50 Mbp
70 57 4.05 Mbp 11 35.30 Mbp
80 112 1.11 Mbp 16 16.16 Mbp
90 - - 45 1.07 Mbp
100 - - - -
0.896x 1320 1.10 Gbp 932 1.17 Gbp
Individual 1 Paternal Assembly
Version assembly_rockefeller_trio_1.6 from 30 August 2019
bMelUnd1.pat.asm.20190830.fasta.gz (300 MB)

Contigs Scaffolds
NG LG Len LG Len
10 2 41.87 Mbp 0 241.60 Mbp
20 6 25.46 Mbp 1 116.19 Mbp
30 11 21.98 Mbp 2 112.87 Mbp
40 18 14.91 Mbp 3 99.20 Mbp
50 28 9.58 Mbp 4 87.11 Mbp
60 46 4.97 Mbp 5 86.53 Mbp
70 85 1.98 Mbp 8 45.27 Mbp
80 204 0.58 Mbp 11 23.07 Mbp
90 865 51.90 Kbp 52 0.35 Mbp
100 - - - -
0.905x 1076 1.11 Gbp 338 1.13 Gbp
NG based on genome size 1.23 Gbp.

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.