Phocoena sinus

vaquita


Information

public domain

Raw Data

Datatype Approximate Coverage Download Size
10x67.26x104.510 GB
Arima173.71x254.886 GB
Bionano396.81x2.220 GB
PacBio ScrapsN/A612.464 GB
PacBio SubReads108.93x561.436 GB
Coverage based on genome size 3.00 Gbp.
Last upload on 9 May 2019.
Download each datatype using the AWS Command Line Interface:

Assemblies

Individual 1 Primary Assembly
Version assembly_vgp_standard_1.5 from 31 May 2019
mPhoSin1.pri.asm.20190531.fasta.gz (697 MB)

Contigs Scaffolds
NG LG Len LG Len
10 5 37.50 Mbp 1 178.56 Mbp
20 15 30.57 Mbp 3 131.66 Mbp
30 26 24.60 Mbp 6 110.41 Mbp
40 39 19.98 Mbp 8 102.83 Mbp
50 55 16.12 Mbp 12 89.76 Mbp
60 76 12.35 Mbp 15 85.25 Mbp
70 106 7.41 Mbp 19 46.87 Mbp
80 - - - -
90 - - - -
100 - - - -
0.788x 274 2.36 Gbp 73 2.37 Gbp
Individual 1 Alternate Assembly
Version assembly_vgp_standard_1.5 from 31 May 2019
mPhoSin1.alt.asm.20190531.fasta.gz (298 MB)

Contigs Scaffolds
NG LG Len LG Len
10 957 0.20 Mbp 957 0.20 Mbp
20 2973 0.11 Mbp 2973 0.11 Mbp
30 6946 50.89 Kbp 6946 50.89 Kbp
40 - - - -
50 - - - -
60 - - - -
70 - - - -
80 - - - -
90 - - - -
100 - - - -
0.332x 9469 1.00 Gbp 9469 1.00 Gbp
NG based on genome size 3.00 Gbp.

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.