Sciurus carolinensis

grey squirrel


Information

NCBI Taxonomy Browser
CC BY 2.0, Judy Gallagher (flickr)

Raw Data

Datatype Approximate Coverage Download Size
10xN/A167.150 GB
Dovetail GenomicsN/A237.270 GB
PacBio SubReadsN/A382.059 GB
No genome size estimate available.
Last upload on 8 August 2019.
Download each datatype using the AWS Command Line Interface:

Assemblies


Individual 1 Primary Assembly
Version assembly_cambridge from 10 August 2019
mSciCar1.pri.asm.20190810.fasta.gz (833 MB)

Contigs Scaffolds
NG LG Len LG Len
10 5 44.40 Mbp 1 157.83 Mbp
20 12 35.14 Mbp 3 107.32 Mbp
30 22 25.19 Mbp 7 83.96 Mbp
40 34 20.21 Mbp 10 70.39 Mbp
50 50 14.00 Mbp 16 43.31 Mbp
60 73 10.84 Mbp 24 29.10 Mbp
70 105 7.09 Mbp 35 17.94 Mbp
80 169 2.83 Mbp 61 7.58 Mbp
90 424 0.48 Mbp 124 2.54 Mbp
100 2577 3.80 Kbp 926 10.39 Kbp
1.000x 2578 2.82 Gbp 927 2.82 Gbp
Individual 1 Alternate Assembly
Version assembly_cambridge from 10 August 2019
mSciCar1.alt.asm.20190810.fasta.gz (614 MB)

Contigs Scaffolds
NG LG Len LG Len
10 100 1.58 Mbp 100 1.58 Mbp
20 253 1.15 Mbp 253 1.15 Mbp
30 455 0.88 Mbp 455 0.88 Mbp
40 725 0.66 Mbp 725 0.66 Mbp
50 1081 0.49 Mbp 1081 0.49 Mbp
60 1579 0.35 Mbp 1579 0.35 Mbp
70 2327 0.22 Mbp 2327 0.22 Mbp
80 3508 0.14 Mbp 3508 0.14 Mbp
90 5376 85.91 Kbp 5376 85.91 Kbp
100 9506 1.04 Kbp 9506 1.04 Kbp
1.000x 9507 2.06 Gbp 9507 2.06 Gbp
NG based on each assembly size.
(No genome size estimate available.)

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