Trichosurus vulpecula

common brushtail possum


Information

NCBI Taxonomy Browser
CC BY 2.0 Donald Hobern (flickr)

Raw Data

Datatype Approximate Coverage Download Size
10x80.72x115.568 GB
Arima148.36x227.757 GB
Bionano197.07x1.178 GB
PacBio SubReads60.73x315.605 GB
Coverage based on genome size 3.00 Gbp.
Last upload on 17 May 2019.
Download each datatype using the AWS Command Line Interface:

Assemblies


Individual 1 Primary Assembly
Version assembly_vgp_standard_1.5 from 15 August 2019
mTriVul1.pri.asm.20190815.fasta.gz (959 MB)

Contigs Scaffolds
NG LG Len LG Len
10 15 13.76 Mbp 0 0.69 Gbp
20 41 9.66 Mbp 0 0.69 Gbp
30 76 7.41 Mbp 1 0.57 Gbp
40 122 5.82 Mbp 1 0.57 Gbp
50 180 4.82 Mbp 2 448.88 Mbp
60 248 4.06 Mbp 3 280.74 Mbp
70 332 3.18 Mbp 4 277.19 Mbp
80 445 2.26 Mbp 5 220.88 Mbp
90 600 1.63 Mbp 6 213.63 Mbp
100 834 1.01 Mbp 8 156.60 Mbp
1.123x 2015 3.37 Gbp 238 3.39 Gbp
Individual 1 Alternate Assembly
Version assembly_vgp_standard_1.5 from 15 August 2019
mTriVul1.alt.asm.20190815.fasta.gz (749 MB)

Contigs Scaffolds
NG LG Len LG Len
10 142 1.56 Mbp 142 1.56 Mbp
20 381 1.06 Mbp 381 1.06 Mbp
30 709 0.80 Mbp 709 0.80 Mbp
40 1143 0.60 Mbp 1143 0.60 Mbp
50 1722 0.44 Mbp 1722 0.44 Mbp
60 2552 0.30 Mbp 2552 0.30 Mbp
70 3902 0.16 Mbp 3902 0.16 Mbp
80 7061 57.82 Kbp 7061 57.82 Kbp
90 - - - -
100 - - - -
0.854x 11809 2.56 Gbp 11809 2.56 Gbp
NG based on genome size 3.00 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 4 October 2019
mTriVul1.MT.20191004.fasta.gz (5 KB)

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.