Anabas testudineus

climbing perch


Information

public domain

Raw Data

Datatype Approximate Coverage Download Size
10x181.84x78.050 GB
Arima149.14x50.861 GB
Bionano3640.00x3.216 GB
PacBio ScrapsN/A88.446 GB
PacBio SubReads58.82x69.835 GB
Coverage based on genome size 0.66 Gbp.
Last upload on 9 April 2018.
Download each datatype using the AWS Command Line Interface:
aws s3 --no-sign-request sync s3://genomeark/species/Anabas_testudineus/fAnaTes1/genomic_data/10x/ .
aws s3 --no-sign-request sync s3://genomeark/species/Anabas_testudineus/fAnaTes1/genomic_data/arima/ .
aws s3 --no-sign-request sync s3://genomeark/species/Anabas_testudineus/fAnaTes1/genomic_data/bionano/ .
aws s3 --no-sign-request sync s3://genomeark/species/Anabas_testudineus/fAnaTes1/genomic_data/pacbio/ . --exclude "*scraps.bam*"

Assemblies

Individual 1 Primary Assembly
Version assembly_curated from 11 December 2018
fAnaTes1.pri.cur.20181211.fasta.gz (149 MB)

Contigs Scaffolds
NG LG Len LG Len
10 4 13.92 Mbp 2 28.52 Mbp
20 9 12.15 Mbp 4 27.36 Mbp
30 15 9.90 Mbp 6 26.09 Mbp
40 22 7.97 Mbp 9 25.06 Mbp
50 33 4.57 Mbp 12 23.46 Mbp
60 51 2.85 Mbp 15 21.92 Mbp
70 85 1.50 Mbp 18 19.93 Mbp
80 169 0.37 Mbp 21 18.69 Mbp
90 - - - -
100 - - - -
0.833x 316 0.55 Gbp 50 0.56 Gbp
Individual 1 Alternate Assembly
Version assembly_curated from 11 December 2018
fAnaTes1.alt.cur.20181211.fasta.gz (157 MB)

Contigs Scaffolds
NG LG Len LG Len
10 15 3.23 Mbp 14 3.31 Mbp
20 39 2.24 Mbp 37 2.38 Mbp
30 76 1.53 Mbp 72 1.60 Mbp
40 127 1.07 Mbp 121 1.14 Mbp
50 202 0.71 Mbp 192 0.75 Mbp
60 322 0.43 Mbp 305 0.46 Mbp
70 557 0.17 Mbp 520 0.18 Mbp
80 2079 16.43 Kbp 1922 18.26 Kbp
90 - - - -
100 - - - -
0.810x 2677 0.54 Gbp 2641 0.54 Gbp
NG based on genome size 0.66 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_mt_milan from 10 March 2019
fAnaTes1.MT.20190310.fasta.gz (5 KB)

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.