Astatotilapia calliptera
eastern happy
Resources
Data:
s3://genomeark/species/Astatotilapia_calliptera
GenBank:
Not available.
Raw Data
Link: s3://genomeark/species/Astatotilapia_calliptera
Last upload: 2 March 2018
| Datatype | Approximate Coverage | Download Size |
|---|---|---|
| 10x | 124.20x | 78.888 GB |
| Bionano | 109.85x | 0.128 GB |
| PacBio SubReads | 77.04x | 269.612 GB |
Coverage based on genome size 0.97 Gbp.
Assemblies
Primary
Version: assembly_vgp_standard_1.0
Date: 17 August 2018
Link: fAstCal1.pri.asm.20180817.fasta.gz (0.257 GB)
Date: 17 August 2018
Link: fAstCal1.pri.asm.20180817.fasta.gz (0.257 GB)
| Contigs | Scaffolds | |||
|---|---|---|---|---|
| NG | LG | Len | LG | Len |
| 10 | 8 | 8.80 Mbp | 2 | 28.71 Mbp |
| 20 | 22 | 5.90 Mbp | 6 | 22.64 Mbp |
| 30 | 40 | 4.47 Mbp | 11 | 16.51 Mbp |
| 40 | 64 | 3.78 Mbp | 17 | 15.16 Mbp |
| 50 | 94 | 2.67 Mbp | 24 | 12.11 Mbp |
| 60 | 137 | 2.02 Mbp | 33 | 8.53 Mbp |
| 70 | 193 | 1.46 Mbp | 48 | 5.57 Mbp |
| 80 | 281 | 0.85 Mbp | 72 | 2.96 Mbp |
| 90 | 579 | 99.96 Kbp | 149 | 0.31 Mbp |
| 100 | - | - | - | - |
| 0.921x | 1008 | 0.90 Gbp | 549 | 0.90 Gbp |
Alternate
Version: assembly_vgp_standard_1.0
Date: 17 August 2018
Link: fAstCal1.alt.asm.20180817.fasta.gz (0.138 GB)
Date: 17 August 2018
Link: fAstCal1.alt.asm.20180817.fasta.gz (0.138 GB)
| Contigs | Scaffolds | |||
|---|---|---|---|---|
| NG | LG | Len | LG | Len |
| 10 | 263 | 0.23 Mbp | 263 | 0.23 Mbp |
| 20 | 896 | 0.11 Mbp | 896 | 0.11 Mbp |
| 30 | 2146 | 57.56 Kbp | 2146 | 57.56 Kbp |
| 40 | 4480 | 31.24 Kbp | 4480 | 31.24 Kbp |
| 50 | - | - | - | - |
| 60 | - | - | - | - |
| 70 | - | - | - | - |
| 80 | - | - | - | - |
| 90 | - | - | - | - |
| 100 | - | - | - | - |
| 0.481x | 8123 | 467.67 Mbp | 8123 | 467.67 Mbp |
Data Use Policy
VGP samples and data come from a variety of sources. To support fair and productive use of this data,
please abide by the Data Use Policy
and contact us with any questions.