Asterias rubens

common starfish


Information

NCBI Taxonomy Browser
CC BY-SA 4.0, Hans Hillewaert (wikimedia)

Raw Data

Datatype Approximate Coverage Download Size
Dovetail GenomicsN/A77.682 GB
IlluminaN/A78.804 GB
PacBio SubReadsN/A83.954 GB
No genome size estimate available.
Last upload on 8 August 2019.
Download each datatype using the AWS Command Line Interface:
aws s3 --no-sign-request sync s3://genomeark/species/Asterias_rubens/eAstRub1/genomic_data/dovetail/ .
aws s3 --no-sign-request sync s3://genomeark/species/Asterias_rubens/eAstRub1/genomic_data/illumina/ .
aws s3 --no-sign-request sync s3://genomeark/species/Asterias_rubens/eAstRub1/genomic_data/pacbio/ . --exclude "*scraps.bam* --exclude "*ccs.bam*"

Assemblies

Individual 1 Primary Assembly
Version assembly_curated from 9 August 2019
eAstRub1.pri.cur.20190809.fasta.gz (119 MB)

Contigs Scaffolds
NG LG Len LG Len
10 10 2.88 Mbp 1 25.66 Mbp
20 26 2.43 Mbp 3 22.72 Mbp
30 45 2.02 Mbp 4 22.60 Mbp
40 67 1.76 Mbp 6 21.89 Mbp
50 93 1.38 Mbp 8 20.56 Mbp
60 126 1.11 Mbp 10 18.07 Mbp
70 168 0.88 Mbp 13 14.67 Mbp
80 224 0.63 Mbp 16 13.49 Mbp
90 306 0.39 Mbp 19 12.66 Mbp
100 620 6.70 Kbp 149 13.68 Kbp
1.000x 621 417.45 Mbp 150 417.60 Mbp
Individual 1 Alternate Assembly
Version assembly_curated from 9 August 2019
eAstRub1.alt.cur.20190809.fasta.gz (112 MB)

Contigs Scaffolds
NG LG Len LG Len
10 69 0.42 Mbp 69 0.42 Mbp
20 177 0.32 Mbp 177 0.32 Mbp
30 316 0.25 Mbp 316 0.25 Mbp
40 492 0.20 Mbp 492 0.20 Mbp
50 709 0.16 Mbp 709 0.16 Mbp
60 984 0.13 Mbp 984 0.13 Mbp
70 1340 95.76 Kbp 1340 95.76 Kbp
80 1811 70.84 Kbp 1811 70.84 Kbp
90 2485 46.60 Kbp 2485 46.60 Kbp
100 3969 135 bp 3968 135 bp
1.000x 3970 390.77 Mbp 3969 390.77 Mbp
NG based on each assembly size.
(No genome size estimate available.)

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