Chanos chanos

milkfish


Information

Resource
NCBI Taxonomy Browser NCBI:txid29144

Resource Primary Assembly Alternate Assembly
GenBank GCA_902362185.1 GCA_902362175.1
ENA GCA_902362185.1 GCA_902362175.1
UCSC Genome Browser GCA_902362185.1 GCA_902362175.1

CC BY-SA 4.0 Hectonichus (wikimedia)

Raw Data

Datatype Approximate Size Download Size
Bases Coverage
10x136.47 Gbp207.74x80.753 GB
Bionano746.42 Gbp1136.25x1.060 GB
Dovetail Genomics130.54 Gbp198.72x81.257 GB
PacBio SubReads48.66 Gbp74.08x82.899 GB
PacBio HiFi18.56 Gbp28.26x14.427 GB
Coverage based on genome size 0.66 Gbp.
Last upload on 5 November 2019.
Download each datatype using the AWS Command Line Interface:

Assemblies

Individual 1 Primary Assembly
Version assembly_curated from 5 August 2019
fChaCha1.pri.cur.20190805.fasta.gz (185 MB)

Contigs Scaffolds
NG LG Len LG Len
10 1 38.48 Mbp 1 59.74 Mbp
20 3 37.80 Mbp 2 58.65 Mbp
30 5 31.75 Mbp 3 53.91 Mbp
40 7 23.79 Mbp 4 53.69 Mbp
50 10 23.13 Mbp 5 50.30 Mbp
60 13 16.20 Mbp 7 48.34 Mbp
70 19 8.84 Mbp 8 43.79 Mbp
80 29 4.91 Mbp 10 25.52 Mbp
90 49 2.43 Mbp 12 23.84 Mbp
100 140 1.59 Kbp 29 21.53 Kbp
1.000x 141 0.65 Gbp 30 0.66 Gbp
NG based on genome size 0.66 Gbp.
Individual 1 Alternate Assembly
Version assembly_curated from 5 August 2019
fChaCha1.alt.cur.20190805.fasta.gz (181 MB)

Contigs Scaffolds
NG LG Len LG Len
10 34 1.50 Mbp 34 1.50 Mbp
20 86 1.02 Mbp 86 1.02 Mbp
30 160 0.77 Mbp 160 0.77 Mbp
40 252 0.63 Mbp 252 0.63 Mbp
50 365 0.51 Mbp 365 0.51 Mbp
60 504 0.41 Mbp 504 0.41 Mbp
70 678 0.33 Mbp 678 0.33 Mbp
80 901 0.24 Mbp 901 0.24 Mbp
90 1208 0.17 Mbp 1208 0.17 Mbp
100 1939 721 bp 1936 721 bp
1.000x 1940 0.64 Gbp 1937 0.64 Gbp
NG based on genome size 0.66 Gbp.

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