Raw Data
| Datatype | Approximate Coverage | Download Size |
|---|---|---|
| 10x | 154.98x | 78.198 GB |
| Arima | 116.03x | 65.246 GB |
| Bionano | 806.51x | 1.395 GB |
| PacBio SubReads | 88.32x | 154.494 GB |
Coverage based on genome size 1.00 Gbp.
Last upload on 3 March 2020.
Download each datatype using the AWS Command Line Interface:
aws s3 --no-sign-request sync s3://genomeark/species/Ciconia_maguari/bCicMag1/genomic_data/10x/ .
aws s3 --no-sign-request sync s3://genomeark/species/Ciconia_maguari/bCicMag1/genomic_data/arima/ .
aws s3 --no-sign-request sync s3://genomeark/species/Ciconia_maguari/bCicMag1/genomic_data/bionano/ .
aws s3 --no-sign-request sync s3://genomeark/species/Ciconia_maguari/bCicMag1/genomic_data/pacbio/ . --exclude "*ccs.bam*"
aws s3 --no-sign-request sync s3://genomeark/species/Ciconia_maguari/bCicMag1/genomic_data/arima/ .
aws s3 --no-sign-request sync s3://genomeark/species/Ciconia_maguari/bCicMag1/genomic_data/bionano/ .
aws s3 --no-sign-request sync s3://genomeark/species/Ciconia_maguari/bCicMag1/genomic_data/pacbio/ . --exclude "*ccs.bam*"
Assemblies
Individual 1 Primary Assembly
No primary assembly available.
No primary assembly available.
Individual 1 Alternate Assembly
No alternate assembly available.
No alternate assembly available.
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 26 February 2020
bCicMag1.MT.20200226.fasta.gz (5 KB)
Version assembly_MT_rockefeller from 26 February 2020
bCicMag1.MT.20200226.fasta.gz (5 KB)
Data Use Policy
VGP samples and data come from a variety of sources. To support fair and productive use of this data,
please abide by the Data Use Policy
and contact us with any questions.