Cuculus canorus

common cuckoo


Information

Resource
NCBI Taxonomy Browser NCBI:txid55661

Resource Primary Assembly Alternate Assembly
GenBank GCA_017976375.1 GCA_017976305.1
ENA GCA_017976375.1 GCA_017976305.1
UCSC Genome Browser GCA_017976375.1 GCA_017976305.1

CC BY 2.0 Ron Knight (flickr)

Raw Data

Datatype Approximate Size Download Size
Bases Coverage
10x127.33 Gbp90.95x60.946 GB
Arima121.12 Gbp86.51x72.339 GB
Bionano286.47 Gbp204.62x0.588 GB
PacBio SubReads90.04 Gbp64.31x155.723 GB
Coverage based on genome size 1.40 Gbp.
Last upload on 14 July 2020.
Download each datatype using the AWS Command Line Interface:

Assemblies

Individual 1 Primary Assembly
Version assembly_curated from 30 March 2021
bCucCan1.pri.cur.20210330.fasta.gz (342 MB)

Contigs Scaffolds
NG LG Len LG Len
10 1 63.34 Mbp 0 209.32 Mbp
20 5 33.56 Mbp 1 162.17 Mbp
30 9 29.13 Mbp 2 122.85 Mbp
40 15 21.77 Mbp 3 79.99 Mbp
50 22 15.63 Mbp 5 69.23 Mbp
60 34 11.15 Mbp 9 28.16 Mbp
70 50 6.09 Mbp 14 21.77 Mbp
80 89 1.62 Mbp 25 8.01 Mbp
90 - - - -
100 - - - -
0.839x 446 1.18 Gbp 150 1.18 Gbp
NG based on genome size 1.40 Gbp.
Individual 1 Alternate Assembly
Version assembly_curated from 30 March 2021
bCucCan1.alt.cur.20210330.fasta.gz (310 MB)

Contigs Scaffolds
NG LG Len LG Len
10 11 9.03 Mbp 11 9.03 Mbp
20 31 6.16 Mbp 31 6.16 Mbp
30 57 4.62 Mbp 57 4.62 Mbp
40 92 3.39 Mbp 92 3.39 Mbp
50 141 2.36 Mbp 141 2.36 Mbp
60 215 1.52 Mbp 215 1.52 Mbp
70 361 0.53 Mbp 361 0.53 Mbp
80 - - - -
90 - - - -
100 - - - -
0.760x 1012 1.06 Gbp 1004 1.06 Gbp
NG based on genome size 1.40 Gbp.

Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 16 December 2019
bCucCan1.MT.20191216.fasta.gz (5 KB)

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