Cyclopterus lumpus

lumpfish


Information

Resource
NCBI Taxonomy Browser NCBI:txid8103

Resource Primary Assembly Alternate Assembly
GenBank GCA_009769545.1 GCA_009769515.1
ENA GCA_009769545.1 GCA_009769515.1
UCSC Genome Browser GCA_009769545.1 GCA_009769515.1

CC BY-SA 3.0 Simon Pierre Barrette (wikimedia)

Raw Data

Datatype Approximate Size Download Size
Bases Coverage
10x61.32 Gbp61.32x29.348 GB
Arima93.07 Gbp93.07x56.298 GB
Bionano508.20 Gbp508.20x0.673 GB
PacBio SubReads55.96 Gbp55.96x96.721 GB
Coverage based on genome size 1.00 Gbp.
Last upload on 5 August 2019.
Download each datatype using the AWS Command Line Interface:

Assemblies

Individual 1 Primary Assembly
Version assembly_curated from 11 October 2019
fCycLum1.pri.cur.20191011.fasta.gz (157 MB)

Contigs Scaffolds
NG LG Len LG Len
10 8 10.80 Mbp 3 28.00 Mbp
20 20 6.41 Mbp 7 26.15 Mbp
30 38 4.35 Mbp 11 23.79 Mbp
40 74 1.96 Mbp 15 21.87 Mbp
50 146 0.91 Mbp 20 17.61 Mbp
60 - - - -
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80 - - - -
90 - - - -
100 - - - -
0.563x 395 0.56 Gbp 48 0.57 Gbp
Individual 1 Alternate Assembly
Version assembly_curated from 11 October 2019
fCycLum1.alt.cur.20191011.fasta.gz (136 MB)

Contigs Scaffolds
NG LG Len LG Len
10 47 1.31 Mbp 47 1.31 Mbp
20 150 0.75 Mbp 150 0.75 Mbp
30 334 0.40 Mbp 334 0.40 Mbp
40 747 0.15 Mbp 747 0.15 Mbp
50 - - - -
60 - - - -
70 - - - -
80 - - - -
90 - - - -
100 - - - -
0.481x 1866 480.97 Mbp 1866 480.97 Mbp
NG based on genome size 1.00 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 2 October 2019
fCycLum1.MT.20191002.fasta.gz (5 KB)

Data Use Policy

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