Dermochelys coriacea

leatherback sea turtle


Information

Resource
NCBI Taxonomy Browser NCBI:txid27794

Resource Primary Assembly Alternate Assembly
GenBank GCA_009764565.1 GCA_009762595.1
ENA GCA_009764565.1 GCA_009762595.1
UCSC Genome Browser GCA_009764565.1 GCA_009762595.1

public domain

Raw Data

Datatype Approximate Coverage Download Size
10x116.79x139.545 GB
Arima73.63x93.416 GB
Bionano675.90x2.931 GB
PacBio SubReads63.68x276.004 GB
Coverage based on genome size 2.50 Gbp.
Last upload on 22 July 2019.
Download each datatype using the AWS Command Line Interface:

Assemblies

Individual 1 Primary Assembly
Version assembly_curated from 6 April 2020
rDerCor1.pri.cur.20200406.fasta.gz (631 MB)

Contigs Scaffolds
NG LG Len LG Len
10 8 23.53 Mbp 0 354.66 Mbp
20 22 15.63 Mbp 1 272.82 Mbp
30 40 11.44 Mbp 2 212.05 Mbp
40 65 8.68 Mbp 4 137.79 Mbp
50 98 6.79 Mbp 5 131.09 Mbp
60 140 5.17 Mbp 8 105.20 Mbp
70 201 3.27 Mbp 10 79.98 Mbp
80 305 1.60 Mbp 18 20.02 Mbp
90 - - - -
100 - - - -
0.864x 612 2.16 Gbp 52 2.17 Gbp
Individual 1 Alternate Assembly
Version assembly_curated from 6 April 2020
rDerCor1.alt.cur.20200406.fasta.gz (435 MB)

Contigs Scaffolds
NG LG Len LG Len
10 355 0.51 Mbp 355 0.51 Mbp
20 956 0.34 Mbp 956 0.34 Mbp
30 1840 0.24 Mbp 1840 0.24 Mbp
40 3139 0.16 Mbp 3139 0.16 Mbp
50 5302 84.33 Kbp 5302 84.33 Kbp
60 - - - -
70 - - - -
80 - - - -
90 - - - -
100 - - - -
0.577x 8982 1.44 Gbp 8982 1.44 Gbp
NG based on genome size 2.50 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 20 August 2019
rDerCor1.MT.20190820.fasta.gz (5 KB)

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.