Electrophorus electricus

electric eel


Information

Resource
NCBI Taxonomy Browser NCBI:txid8005

Resource Primary Assembly Alternate Assembly
GenBank GCA_013347915.1
ENA GCA_013347915.1
UCSC Genome Browser GCA_013347915.1

No image

Raw Data

Datatype Approximate Coverage Download Size
10x73.35x32.991 GB
Bionano198.15x0.205 GB
PacBio SubReads52.97x87.236 GB
Coverage based on genome size 0.97 Gbp.
Last upload on 31 October 2019.
Download each datatype using the AWS Command Line Interface:
aws s3 --no-sign-request sync s3://genomeark/species/Electrophorus_electricus/fEleEle1/genomic_data/10x/ .
aws s3 --no-sign-request sync s3://genomeark/species/Electrophorus_electricus/fEleEle1/genomic_data/bionano/ .
aws s3 --no-sign-request sync s3://genomeark/species/Electrophorus_electricus/fEleEle1/genomic_data/pacbio/ . --exclude "*ccs.bam*"

Assemblies

Individual 1 Primary Assembly
Version assembly_curated from 17 March 2020
fEleEle1.pri.cur.20200317.fasta.gz (162 MB)

Contigs Scaffolds
NG LG Len LG Len
10 5 13.16 Mbp 2 32.54 Mbp
20 13 10.30 Mbp 5 30.14 Mbp
30 25 6.96 Mbp 9 25.66 Mbp
40 42 4.50 Mbp 13 22.70 Mbp
50 76 1.97 Mbp 18 16.41 Mbp
60 - - 25 10.95 Mbp
70 - - - -
80 - - - -
90 - - - -
100 - - - -
0.597x 316 0.58 Gbp 89 0.59 Gbp
Individual 1 Alternate Assembly
Version assembly_curated from 17 March 2020
fEleEle1.alt.cur.20200317.fasta.gz (123 MB)

Contigs Scaffolds
NG LG Len LG Len
10 193 0.36 Mbp 193 0.36 Mbp
20 531 0.24 Mbp 531 0.24 Mbp
30 1032 0.16 Mbp 1032 0.16 Mbp
40 1865 83.12 Kbp 1865 83.12 Kbp
50 - - - -
60 - - - -
70 - - - -
80 - - - -
90 - - - -
100 - - - -
0.442x 2630 428.14 Mbp 2630 428.14 Mbp
NG based on genome size 0.97 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 2 October 2019
fEleEle1.MT.20191002.fasta.gz (5 KB)

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.