Falco rusticolus
gyrfalcon
Information
Resource | |
---|---|
NCBI Taxonomy Browser | NCBI:txid120794 |
Copyright Qatar Falcon Genome Project, Al-Gannas Qatari Society, used with permission
Raw Data
Datatype | Approximate Coverage | Download Size |
---|---|---|
10x | 107.77x | 67.507 GB |
Arima | 86.31x | 72.973 GB |
Bionano | 246.43x | 0.592 GB |
PacBio SubReads | 44.28x | 110.035 GB |
Coverage based on genome size 1.40 Gbp.
Last upload on 3 January 2020.
Download each datatype using the AWS Command Line Interface:
aws s3 --no-sign-request sync s3://genomeark/species/Falco_rusticolus/bFalRus1/genomic_data/10x/ .
aws s3 --no-sign-request sync s3://genomeark/species/Falco_rusticolus/bFalRus1/genomic_data/arima/ .
aws s3 --no-sign-request sync s3://genomeark/species/Falco_rusticolus/bFalRus1/genomic_data/bionano/ .
aws s3 --no-sign-request sync s3://genomeark/species/Falco_rusticolus/bFalRus1/genomic_data/pacbio/ . --exclude "*ccs*bam*"
aws s3 --no-sign-request sync s3://genomeark/species/Falco_rusticolus/bFalRus1/genomic_data/arima/ .
aws s3 --no-sign-request sync s3://genomeark/species/Falco_rusticolus/bFalRus1/genomic_data/bionano/ .
aws s3 --no-sign-request sync s3://genomeark/species/Falco_rusticolus/bFalRus1/genomic_data/pacbio/ . --exclude "*ccs*bam*"
Assemblies
Individual 1 Primary Assembly
Version assembly_curated from 20 July 2020
bFalRus1.pri.cur.20200720.fasta.gz (349 MB)
Version assembly_curated from 20 July 2020
bFalRus1.pri.cur.20200720.fasta.gz (349 MB)
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 2 | 32.78 Mbp | 1 | 122.15 Mbp |
20 | 7 | 25.49 Mbp | 2 | 121.28 Mbp |
30 | 13 | 22.35 Mbp | 3 | 112.44 Mbp |
40 | 21 | 15.69 Mbp | 4 | 92.44 Mbp |
50 | 31 | 12.48 Mbp | 6 | 84.79 Mbp |
60 | 44 | 8.39 Mbp | 8 | 65.42 Mbp |
70 | 66 | 3.76 Mbp | 10 | 38.16 Mbp |
80 | 193 | 0.44 Mbp | 15 | 24.10 Mbp |
90 | - | - | - | - |
100 | - | - | - | - |
0.850x | 767 | 1.19 Gbp | 132 | 1.20 Gbp |
Individual 1 Alternate Assembly
Version assembly_curated from 20 July 2020
bFalRus1.alt.cur.20200720.fasta.gz (158 MB)
Version assembly_curated from 20 July 2020
bFalRus1.alt.cur.20200720.fasta.gz (158 MB)
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 841 | 0.12 Mbp | 841 | 0.12 Mbp |
20 | 2416 | 70.84 Kbp | 2416 | 70.84 Kbp |
30 | 4980 | 42.26 Kbp | 4980 | 42.26 Kbp |
40 | - | - | - | - |
50 | - | - | - | - |
60 | - | - | - | - |
70 | - | - | - | - |
80 | - | - | - | - |
90 | - | - | - | - |
100 | - | - | - | - |
0.369x | 8370 | 0.52 Gbp | 8370 | 0.52 Gbp |
NG based on genome size 1.40 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 16 December 2019
bFalRus1.MT.20191216.fasta.gz (6 KB)
Version assembly_MT_rockefeller from 16 December 2019
bFalRus1.MT.20191216.fasta.gz (6 KB)
Data Use Policy
VGP samples and data come from a variety of sources. To support fair and productive use of this data,
please abide by the Data Use Policy
and contact us with any questions.