Gadus morhua

Atlantic cod


Information

Resource
NCBI Taxonomy Browser NCBI:txid8049

Resource Primary Assembly Alternate Assembly
GenBank GCA_902167405.1 GCA_902167395.1
ENA GCA_902167405.1 GCA_902167395.1
UCSC Genome Browser GCA_902167405.1 GCA_902167395.1

CC BY-SA 4.0, Hans Hillewaert (wikimedia)

Raw Data

Datatype Approximate Size Download Size
Bases Coverage
10x111.21 Gbp165.99x73.626 GB
Arima107.54 Gbp160.52x69.890 GB
Bionano949.20 Gbp1416.82x1.116 GB
PacBio SubReads87.35 Gbp130.39x271.813 GB
Coverage based on genome size 0.67 Gbp.
Last upload on 1 May 2019.
Download each datatype using the AWS Command Line Interface:

Assemblies

Individual 1 Primary Assembly
Version assembly_curated from 10 July 2019
fGadMor1.pri.cur.20190710.fasta.gz (181 MB)

Contigs Scaffolds
NG LG Len LG Len
10 12 3.75 Mbp 1 34.79 Mbp
20 35 2.28 Mbp 3 30.95 Mbp
30 67 1.71 Mbp 5 30.88 Mbp
40 111 1.27 Mbp 8 29.59 Mbp
50 168 1.02 Mbp 10 28.73 Mbp
60 240 0.77 Mbp 12 27.76 Mbp
70 336 0.58 Mbp 15 25.30 Mbp
80 471 0.38 Mbp 17 24.90 Mbp
90 691 0.22 Mbp 20 22.36 Mbp
100 1441 1 bp 225 3.51 Kbp
1.000x 1442 0.65 Gbp 226 0.67 Gbp
Individual 1 Alternate Assembly
Version assembly_curated from 10 July 2019
fGadMor1.alt.cur.20190710.fasta.gz (164 MB)

Contigs Scaffolds
NG LG Len LG Len
10 57 0.76 Mbp 57 0.76 Mbp
20 152 0.54 Mbp 152 0.54 Mbp
30 275 0.42 Mbp 275 0.42 Mbp
40 430 0.34 Mbp 430 0.34 Mbp
50 621 0.28 Mbp 620 0.28 Mbp
60 853 0.23 Mbp 853 0.23 Mbp
70 1142 0.18 Mbp 1142 0.18 Mbp
80 1515 0.13 Mbp 1514 0.13 Mbp
90 2063 82.64 Kbp 2061 82.74 Kbp
100 3594 252 bp 3591 252 bp
1.000x 3595 0.58 Gbp 3592 0.58 Gbp
NG based on genome size 0.67 Gbp.

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