Raw Data
Datatype | Approximate Coverage | Download Size |
---|---|---|
10x | 79.15x | 52.802 GB |
Arima | 277.66x | 189.254 GB |
Bionano | 456.16x | 1.025 GB |
Illumina | 183.08x | 109.707 GB |
PacBio SubReads | 102.01x | 213.318 GB |
Coverage based on genome size 1.21 Gbp.
Last upload on 17 September 2019.
Download each datatype using the AWS Command Line Interface:
aws s3 --no-sign-request sync s3://genomeark/species/Gallus_gallus/bGalGal1/genomic_data/10x/ .
aws s3 --no-sign-request sync s3://genomeark/species/Gallus_gallus/bGalGal1/genomic_data/arima/ .
aws s3 --no-sign-request sync s3://genomeark/species/Gallus_gallus/bGalGal2/genomic_data/arima/ .
aws s3 --no-sign-request sync s3://genomeark/species/Gallus_gallus/bGalGal3/genomic_data/arima/ .
aws s3 --no-sign-request sync s3://genomeark/species/Gallus_gallus/bGalGal1/genomic_data/bionano/ .
aws s3 --no-sign-request sync s3://genomeark/species/Gallus_gallus/bGalGal2/genomic_data/illumina/ .
aws s3 --no-sign-request sync s3://genomeark/species/Gallus_gallus/bGalGal3/genomic_data/illumina/ .
aws s3 --no-sign-request sync s3://genomeark/species/Gallus_gallus/bGalGal1/genomic_data/pacbio/ . --exclude "*ccs.bam*"
aws s3 --no-sign-request sync s3://genomeark/species/Gallus_gallus/bGalGal1/genomic_data/arima/ .
aws s3 --no-sign-request sync s3://genomeark/species/Gallus_gallus/bGalGal2/genomic_data/arima/ .
aws s3 --no-sign-request sync s3://genomeark/species/Gallus_gallus/bGalGal3/genomic_data/arima/ .
aws s3 --no-sign-request sync s3://genomeark/species/Gallus_gallus/bGalGal1/genomic_data/bionano/ .
aws s3 --no-sign-request sync s3://genomeark/species/Gallus_gallus/bGalGal2/genomic_data/illumina/ .
aws s3 --no-sign-request sync s3://genomeark/species/Gallus_gallus/bGalGal3/genomic_data/illumina/ .
aws s3 --no-sign-request sync s3://genomeark/species/Gallus_gallus/bGalGal1/genomic_data/pacbio/ . --exclude "*ccs.bam*"
Assemblies
Individual 1 Primary Assembly
No primary assembly available.
No primary assembly available.
Individual 1 Alternate Assembly
No alternate assembly available.
No alternate assembly available.
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 2 October 2019
bGalGal1.MT.20191002.fasta.gz (5 KB)
Version assembly_MT_rockefeller from 2 October 2019
bGalGal1.MT.20191002.fasta.gz (5 KB)
Data Use Policy
VGP samples and data come from a variety of sources. To support fair and productive use of this data,
please abide by the Data Use Policy
and contact us with any questions.