Geothlypis trichas

common yellowthroat


Information

NCBI Taxonomy Browser
CC BY-SA 2.0 Dan Pancamo (flickr)

Raw Data

Datatype Approximate Coverage Download Size
10xN/A28.521 GB
ArimaN/A65.322 GB
BionanoN/A2.877 GB
PacBio ScrapsN/A384.234 GB
PacBio SubReadsN/A133.351 GB
No genome size estimate available.
Last upload on 10 December 2018.
Download each datatype using the AWS Command Line Interface:

Assemblies


Individual 1 Primary Assembly
Version assembly_vgp_standard_1.5 from 17 July 2019
bGeoTri1.pri.asm.20190717.fasta.gz (310 MB)

Contigs Scaffolds
NG LG Len LG Len
10 8 9.55 Mbp 0 143.27 Mbp
20 20 8.34 Mbp 1 112.37 Mbp
30 35 6.14 Mbp 2 94.71 Mbp
40 54 4.69 Mbp 4 70.71 Mbp
50 81 3.25 Mbp 5 68.24 Mbp
60 120 2.26 Mbp 8 31.96 Mbp
70 179 1.31 Mbp 12 20.88 Mbp
80 283 0.82 Mbp 18 16.10 Mbp
90 484 0.32 Mbp 29 5.78 Mbp
100 1758 813 bp 512 1.63 Kbp
1.000x 1759 1.07 Gbp 513 1.10 Gbp
Individual 1 Alternate Assembly
Version assembly_vgp_standard_1.5 from 17 July 2019
bGeoTri1.alt.asm.20190717.fasta.gz (285 MB)

Contigs Scaffolds
NG LG Len LG Len
10 19 3.72 Mbp 19 3.72 Mbp
20 51 2.70 Mbp 51 2.70 Mbp
30 93 1.97 Mbp 93 1.97 Mbp
40 152 1.39 Mbp 152 1.39 Mbp
50 233 1.05 Mbp 233 1.05 Mbp
60 348 0.70 Mbp 348 0.70 Mbp
70 529 0.42 Mbp 529 0.42 Mbp
80 852 0.21 Mbp 852 0.21 Mbp
90 1628 71.66 Kbp 1628 71.66 Kbp
100 4958 564 bp 4958 564 bp
1.000x 4959 0.97 Gbp 4959 0.97 Gbp
NG based on each assembly size.
(No genome size estimate available.)

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.