Homo sapiens

human


Information

Resource
NCBI Taxonomy Browser NCBI:txid9606

public domain

Raw Data

Datatype Approximate Coverage Download Size
10x299.02x448.708 GB
Arima199.10x346.997 GB
Bionano516.30x2.783 GB
Illumina136.34x216.331 GB
PacBio SubReads73.27x402.733 GB
PacBio HiFi62.64x148.849 GB
Coverage based on genome size 3.20 Gbp.
Last upload on 6 January 2020.
Download each datatype using the AWS Command Line Interface:

Assemblies

Individual 3 Primary Assembly
No primary assembly available.

Individual 3 Alternate Assembly
No alternate assembly available.

Individual 3 Mitochondrial Assembly
Version assembly_MT_rockefeller from 16 August 2019
mHomSap3.MT.20190816.fasta.gz (5 KB)

Individual 3 Maternal Assembly
Version assembly_curated from 16 July 2020
mHomSap3.mat.decon.20200716.fasta.gz (834 MB)

Contigs Scaffolds
NG LG Len LG Len
10 6 38.84 Mbp 1 187.62 Mbp
20 17 26.64 Mbp 3 140.89 Mbp
30 31 18.38 Mbp 6 129.44 Mbp
40 50 14.81 Mbp 8 110.61 Mbp
50 75 10.47 Mbp 11 103.61 Mbp
60 110 8.04 Mbp 15 87.76 Mbp
70 162 4.78 Mbp 19 60.18 Mbp
80 265 1.88 Mbp 25 43.69 Mbp
90 1384 67.09 Kbp 163 0.18 Mbp
100 - - - -
0.916x 2741 2.93 Gbp 1601 2.96 Gbp
Individual 3 Paternal Assembly
Version assembly_curated from 16 July 2020
mHomSap3.pat.decon.20200716.fasta.gz (806 MB)

Contigs Scaffolds
NG LG Len LG Len
10 7 34.38 Mbp 1 214.90 Mbp
20 17 26.07 Mbp 2 195.51 Mbp
30 31 21.48 Mbp 4 142.46 Mbp
40 48 16.55 Mbp 6 131.06 Mbp
50 73 11.19 Mbp 9 110.92 Mbp
60 110 6.89 Mbp 13 78.14 Mbp
70 169 3.88 Mbp 17 56.41 Mbp
80 342 0.77 Mbp 24 29.61 Mbp
90 - - - -
100 - - - -
0.874x 3286 2.80 Gbp 1918 2.85 Gbp
NG based on genome size 3.20 Gbp.

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.