Lutra lutra

European otter


Information

NCBI Taxonomy Browser
(pixabay)

Raw Data

Datatype Approximate Coverage Download Size
10xN/A165.375 GB
PacBio SubReadsN/A273.251 GB
No genome size estimate available.
Last upload on 5 July 2019.
Download each datatype using the AWS Command Line Interface:

Assemblies


Individual 1 Primary Assembly
Version assembly_curated from 22 August 2019
mLutLut1.pri.cur.20190822.fasta.gz (709 MB)

Contigs Scaffolds
NG LG Len LG Len
10 2 85.73 Mbp 1 210.65 Mbp
20 5 63.46 Mbp 2 201.32 Mbp
30 10 52.24 Mbp 3 197.71 Mbp
40 16 39.86 Mbp 4 165.81 Mbp
50 22 30.40 Mbp 6 149.00 Mbp
60 31 24.23 Mbp 8 144.09 Mbp
70 43 18.92 Mbp 10 108.79 Mbp
80 57 14.61 Mbp 12 96.45 Mbp
90 80 7.48 Mbp 14 89.08 Mbp
100 227 15.22 Kbp 42 15.22 Kbp
1.000x 228 2.44 Gbp 43 2.44 Gbp
Individual 1 Alternate Assembly
Version assembly_curated from 22 August 2019
mLutLut1.alt.cur.20190822.fasta.gz (315 MB)

Contigs Scaffolds
NG LG Len LG Len
10 48 1.28 Mbp 48 1.28 Mbp
20 197 0.51 Mbp 197 0.51 Mbp
30 472 0.32 Mbp 472 0.32 Mbp
40 871 0.23 Mbp 871 0.23 Mbp
50 1411 0.17 Mbp 1411 0.17 Mbp
60 2120 0.13 Mbp 2120 0.13 Mbp
70 3053 0.10 Mbp 3053 0.10 Mbp
80 4285 76.83 Kbp 4285 76.83 Kbp
90 5908 57.85 Kbp 5908 57.85 Kbp
100 8505 338 bp 8505 338 bp
1.000x 8506 1.08 Gbp 8506 1.08 Gbp
NG based on each assembly size.
(No genome size estimate available.)
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 3 October 2019
mLutLut1.MT.20191003.fasta.gz (5 KB)

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VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.