Lynx canadensis

Canada lynx


Information

CC BY 2.0 Keith Williams (flickr)

Raw Data

Datatype Approximate Coverage Download Size
10x131.25x194.683 GB
Arima93.68x114.006 GB
Bionano585.59x2.321 GB
PacBio ScrapsN/A1118.716 GB
PacBio SubReads72.76x311.347 GB
Coverage based on genome size 2.47 Gbp.
Last upload on 16 August 2018.
Download each datatype using the AWS Command Line Interface:

Assemblies

Individual 4 Primary Assembly
Version assembly_curated from 10 January 2019
mLynCan4.pri.cur.20190110.fasta.gz (700 MB)

Contigs Scaffolds
NG LG Len LG Len
10 9 23.42 Mbp 1 220.95 Mbp
20 23 15.13 Mbp 2 205.98 Mbp
30 42 11.74 Mbp 3 168.99 Mbp
40 66 9.13 Mbp 4 158.93 Mbp
50 97 7.41 Mbp 6 146.11 Mbp
60 135 5.67 Mbp 8 139.83 Mbp
70 187 3.86 Mbp 10 115.72 Mbp
80 269 2.38 Mbp 12 93.45 Mbp
90 419 1.10 Mbp 15 69.07 Mbp
100 - - - -
0.974x 913 2.41 Gbp 67 2.41 Gbp
Individual 4 Alternate Assembly
Version assembly_curated from 10 January 2019
mLynCan4.alt.cur.20190110.fasta.gz (425 MB)

Contigs Scaffolds
NG LG Len LG Len
10 596 0.29 Mbp 596 0.29 Mbp
20 1680 0.19 Mbp 1680 0.19 Mbp
30 3330 0.12 Mbp 3330 0.12 Mbp
40 5808 81.95 Kbp 5807 81.96 Kbp
50 9673 49.93 Kbp 9672 49.93 Kbp
60 - - - -
70 - - - -
80 - - - -
90 - - - -
100 - - - -
0.573x 15036 1.42 Gbp 15033 1.42 Gbp
NG based on genome size 2.47 Gbp.
Individual 4 Mitochondrial Assembly
Version assembly_mt_milan from 10 March 2019
mLynCan4.MT.20190310.fasta.gz (5 KB)

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.