Mastacembelus armatus

tire-track eel


Information

public domain

Raw Data

Datatype Approximate Coverage Download Size
10x153.39x79.367 GB
Arima194.77x71.281 GB
Bionano2140.44x2.687 GB
PacBio ScrapsN/A79.841 GB
PacBio SubReads39.57x53.849 GB
Coverage based on genome size 0.76 Gbp.
Last upload on 12 April 2018.
Download each datatype using the AWS Command Line Interface:
aws s3 --no-sign-request sync s3://genomeark/species/Mastacembelus_armatus/fMasArm1/genomic_data/10x/ .
aws s3 --no-sign-request sync s3://genomeark/species/Mastacembelus_armatus/fMasArm1/genomic_data/arima/ .
aws s3 --no-sign-request sync s3://genomeark/species/Mastacembelus_armatus/fMasArm1/genomic_data/bionano/ .
aws s3 --no-sign-request sync s3://genomeark/species/Mastacembelus_armatus/fMasArm1/genomic_data/pacbio/ . --exclude "*scraps.bam*"

Assemblies

Individual 1 Primary Assembly
Version assembly_curated from 5 March 2019
fMasArm1.pri.cur.20190305.fasta.gz (169 MB)

Contigs Scaffolds
NG LG Len LG Len
10 4 13.57 Mbp 2 28.73 Mbp
20 10 10.96 Mbp 5 27.50 Mbp
30 17 8.70 Mbp 8 25.86 Mbp
40 27 6.69 Mbp 11 24.95 Mbp
50 40 4.76 Mbp 14 23.29 Mbp
60 61 2.31 Mbp 17 21.33 Mbp
70 111 0.90 Mbp 21 19.68 Mbp
80 - - - -
90 - - - -
100 - - - -
0.765x 360 0.58 Gbp 122 0.59 Gbp
Individual 1 Alternate Assembly
Version assembly_curated from 5 March 2019
fMasArm1.alt.cur.20190305.fasta.gz (13 MB)

Contigs Scaffolds
NG LG Len LG Len
10 - - - -
20 - - - -
30 - - - -
40 - - - -
50 - - - -
60 - - - -
70 - - - -
80 - - - -
90 - - - -
100 - - - -
0.058x 1437 43.70 Mbp 1437 43.70 Mbp
NG based on genome size 0.76 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_mt_milan from 4 March 2019
fMasArm1.MT.20190304.fasta.gz (5 KB)

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.