Melopsittacus undulatus

budgerigar


Information

NCBI Taxonomy Browser
CC BY-SA 3.0 Atlanta Zoo (wikimedia)

Raw Data

Datatype Approximate Coverage Download Size
10x79.30x50.530 GB
Arima83.65x53.244 GB
Bionano402.68x0.991 GB
Illumina310.57x191.222 GB
PacBio SubReads61.11x129.896 GB
Coverage based on genome size 1.23 Gbp.
Last upload on 30 August 2019.
Download each datatype using the AWS Command Line Interface:

Assemblies


Individual 1 Primary Assembly
No primary assembly available.

Individual 1 Alternate Assembly
No alternate assembly available.

Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 20 August 2019
bMelUnd1.MT.20190820.fasta.gz (5 KB)

Individual 1 Maternal Assembly
Version assembly_rockefeller_trio_1.6 from 30 August 2019
bMelUnd1.mat.asm.20190830.fasta.gz (293 MB)

Contigs Scaffolds
NG LG Len LG Len
10 2 46.70 Mbp 1 113.31 Mbp
20 5 37.80 Mbp 2 88.75 Mbp
30 8 36.32 Mbp 3 87.39 Mbp
40 13 17.90 Mbp 4 86.63 Mbp
50 21 12.55 Mbp 6 75.85 Mbp
60 34 7.39 Mbp 8 57.50 Mbp
70 57 4.05 Mbp 11 35.30 Mbp
80 112 1.11 Mbp 16 16.16 Mbp
90 - - 45 1.07 Mbp
100 - - - -
0.896x 1320 1.10 Gbp 932 1.17 Gbp
Individual 1 Paternal Assembly
Version assembly_rockefeller_trio_1.6 from 30 August 2019
bMelUnd1.pat.asm.20190830.fasta.gz (300 MB)

Contigs Scaffolds
NG LG Len LG Len
10 2 41.87 Mbp 0 241.60 Mbp
20 6 25.46 Mbp 1 116.19 Mbp
30 11 21.98 Mbp 2 112.87 Mbp
40 18 14.91 Mbp 3 99.20 Mbp
50 28 9.58 Mbp 4 87.11 Mbp
60 46 4.97 Mbp 5 86.53 Mbp
70 85 1.98 Mbp 8 45.27 Mbp
80 204 0.58 Mbp 11 23.07 Mbp
90 865 51.90 Kbp 52 0.35 Mbp
100 - - - -
0.905x 1076 1.11 Gbp 338 1.13 Gbp
NG based on genome size 1.23 Gbp.

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.