Microcaecilia unicolor

tiny Cayenne caecilian


Information

Apple

Raw Data

Datatype Approximate Coverage Download Size
10xN/A242.655 GB
ArimaN/A166.471 GB
BionanoN/A2.704 GB
Dovetail GenomicsN/A151.277 GB
PacBio ScrapsN/A660.845 GB
PacBio SubReadsN/A441.129 GB
No genome size estimate available.
Last upload on 30 January 2019.
Download each datatype using the AWS Command Line Interface:
aws s3 --no-sign-request sync s3://genomeark/species/Microcaecilia_unicolor/aMicUni1/genomic_data/10x/ .
aws s3 --no-sign-request sync s3://genomeark/species/Microcaecilia_unicolor/aMicUni1/genomic_data/arima/ .
aws s3 --no-sign-request sync s3://genomeark/species/Microcaecilia_unicolor/aMicUni1/genomic_data/bionano/ .
aws s3 --no-sign-request sync s3://genomeark/species/Microcaecilia_unicolor/aMicUni1/genomic_data/dovetail/ .
aws s3 --no-sign-request sync s3://genomeark/species/Microcaecilia_unicolor/aMicUni1/genomic_data/pacbio/ . --exclude "*scraps.bam"

Individual 1 Assemblies

Primary
Version assembly_cambridge from 22 February 2019
aMicUni1.pri.asm.20190222.fasta.gz (1 GB)

Contigs Scaffolds
NG LG Len LG Len
10 35 9.77 Mbp 0 0.59 Gbp
20 89 7.37 Mbp 1 364.29 Mbp
30 161 5.60 Mbp 3 286.47 Mbp
40 253 4.64 Mbp 5 237.46 Mbp
50 366 3.65 Mbp 7 220.90 Mbp
60 509 2.89 Mbp 9 205.41 Mbp
70 693 2.18 Mbp 12 167.22 Mbp
80 952 1.46 Mbp 15 113.41 Mbp
90 1374 0.81 Mbp 20 56.65 Mbp
100 3536 60 bp 1134 60 bp
1.000x 3537 4.64 Gbp 1135 4.73 Gbp
Alternate
Version assembly_cambridge from 22 February 2019
aMicUni1.alt.asm.20190222.fasta.gz (1 GB)

Contigs Scaffolds
NG LG Len LG Len
10 462 0.61 Mbp 462 0.61 Mbp
20 1160 0.47 Mbp 1160 0.47 Mbp
30 2044 0.38 Mbp 2044 0.38 Mbp
40 3138 0.30 Mbp 3138 0.30 Mbp
50 4494 0.25 Mbp 4494 0.25 Mbp
60 6188 0.19 Mbp 6188 0.19 Mbp
70 8348 0.15 Mbp 8348 0.15 Mbp
80 11211 0.11 Mbp 11211 0.11 Mbp
90 15305 72.40 Kbp 15305 72.40 Kbp
100 23871 1 bp 23871 1 bp
1.000x 23872 3.70 Gbp 23872 3.70 Gbp
No genome size estimate available.

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