Mustela erminea

stoat


Information

Resource
NCBI Taxonomy Browser NCBI:txid36723

Resource Primary Assembly Alternate Assembly
GenBank GCA_009829155.1 GCA_009829165.1
ENA GCA_009829155.1 GCA_009829165.1
UCSC Genome Browser GCA_009829155.1 GCA_009829165.1

Copyright Patrick Garvey, used with permission

Raw Data

Datatype Approximate Size Download Size
Bases Coverage
10x305.17 Gbp99.08x146.463 GB
Arima481.67 Gbp156.39x292.220 GB
Bionano461.46 Gbp149.82x0.843 GB
PacBio SubReads193.61 Gbp62.86x331.089 GB
Coverage based on genome size 3.08 Gbp.
Last upload on 13 August 2019.
Download each datatype using the AWS Command Line Interface:

Assemblies

Individual 1 Primary Assembly
Version assembly_curated from 17 October 2019
mMusErm1.pri.cur.20191017.fasta.gz (706 MB)

Contigs Scaffolds
NG LG Len LG Len
10 2 95.27 Mbp 1 165.68 Mbp
20 6 66.52 Mbp 3 151.34 Mbp
30 11 48.95 Mbp 5 145.11 Mbp
40 19 34.66 Mbp 7 130.15 Mbp
50 29 26.51 Mbp 10 109.75 Mbp
60 44 16.14 Mbp 13 92.90 Mbp
70 68 10.30 Mbp 16 85.47 Mbp
80 - - - -
90 - - - -
100 - - - -
0.787x 292 2.42 Gbp 93 2.45 Gbp
Individual 1 Alternate Assembly
Version assembly_curated from 17 October 2019
mMusErm1.alt.cur.20191017.fasta.gz (482 MB)

Contigs Scaffolds
NG LG Len LG Len
10 121 1.91 Mbp 121 1.91 Mbp
20 322 1.30 Mbp 322 1.30 Mbp
30 614 0.87 Mbp 614 0.87 Mbp
40 1080 0.51 Mbp 1080 0.51 Mbp
50 2072 0.17 Mbp 2072 0.17 Mbp
60 - - - -
70 - - - -
80 - - - -
90 - - - -
100 - - - -
0.533x 3327 1.64 Gbp 3327 1.64 Gbp
NG based on genome size 3.08 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 3 October 2019
mMusErm1.MT.20191003.fasta.gz (5 KB)

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.