Myotis myotis
Greater mouse-eared bat
Information
Resource | |
---|---|
NCBI Taxonomy Browser | NCBI:txid51298 |
Resource | Primary Assembly | Alternate Assembly |
---|---|---|
GenBank | GCA_014108235.1 | |
ENA | GCA_014108235.1 | |
UCSC Genome Browser | GCA_014108235.1 |
CC BY-SA 4.0 MissMhisi (wikimedia)
Raw Data
Datatype | Approximate Size | Download Size | |
---|---|---|---|
Bases | Coverage | ||
10x | 96.15 Gbp | 48.00x | 58.454 GB |
Bionano | 1959.84 Gbp | 978.33x | 2.998 GB |
PacBio SubReads | 182.44 Gbp | 91.07x | 322.587 GB |
Phase Genomics | 29.91 Gbp | 14.93x | 15.921 GB |
Coverage based on genome size 2.00 Gbp.
Last upload on 25 November 2019.
Download each datatype using the AWS Command Line Interface:
aws s3 --no-sign-request sync s3://genomeark/species/Myotis_myotis/mMyoMyo1/genomic_data/10x/ .
aws s3 --no-sign-request sync s3://genomeark/species/Myotis_myotis/mMyoMyo1/genomic_data/bionano/ .
aws s3 --no-sign-request sync s3://genomeark/species/Myotis_myotis/mMyoMyo1/genomic_data/pacbio/ . --exclude "*ccs*bam*"
aws s3 --no-sign-request sync s3://genomeark/species/Myotis_myotis/mMyoMyo1/genomic_data/phase/ .
aws s3 --no-sign-request sync s3://genomeark/species/Myotis_myotis/mMyoMyo1/genomic_data/bionano/ .
aws s3 --no-sign-request sync s3://genomeark/species/Myotis_myotis/mMyoMyo1/genomic_data/pacbio/ . --exclude "*ccs*bam*"
aws s3 --no-sign-request sync s3://genomeark/species/Myotis_myotis/mMyoMyo1/genomic_data/phase/ .
Assemblies
Individual 1 Primary Assembly
Version assembly_dresden_DAmar1.0 from 16 April 2019
mMyoMyo1.pri.asm.20190416.fasta.gz (631 MB)
Version assembly_dresden_DAmar1.0 from 16 April 2019
mMyoMyo1.pri.asm.20190416.fasta.gz (631 MB)
Contigs | Scaffolds | |||
---|---|---|---|---|
NG | LG | Len | LG | Len |
10 | 4 | 39.55 Mbp | 0 | 223.37 Mbp |
20 | 10 | 30.73 Mbp | 1 | 217.76 Mbp |
30 | 17 | 23.87 Mbp | 2 | 213.72 Mbp |
40 | 27 | 18.23 Mbp | 4 | 111.27 Mbp |
50 | 40 | 12.51 Mbp | 6 | 94.45 Mbp |
60 | 58 | 9.53 Mbp | 8 | 92.78 Mbp |
70 | 83 | 5.65 Mbp | 10 | 78.48 Mbp |
80 | 128 | 3.44 Mbp | 13 | 55.60 Mbp |
90 | 210 | 1.57 Mbp | 17 | 43.54 Mbp |
100 | 629 | 3.54 Kbp | 91 | 15.96 Kbp |
1.000x | 630 | 1.97 Gbp | 92 | 2.00 Gbp |
NG based on genome size 2.00 Gbp.
Individual 1 Alternate Assembly
No alternate assembly available.
No alternate assembly available.
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 5 December 2019
mMyoMyo1.MT.20191205.fasta.gz (5 KB)
Version assembly_MT_rockefeller from 5 December 2019
mMyoMyo1.MT.20191205.fasta.gz (5 KB)
Data Use Policy
VGP samples and data come from a variety of sources. To support fair and productive use of this data,
please abide by the Data Use Policy
and contact us with any questions.