Myripristis murdjan

pinecone soldierfish


Information

Resource
NCBI Taxonomy Browser NCBI:txid586833

Resource Primary Assembly Alternate Assembly
GenBank GCA_902150065.1 GCA_902148815.1
ENA GCA_902150065.1 GCA_902148815.1
UCSC Genome Browser GCA_902150065.1 GCA_902148815.1

CC BY 2.0 Rickard Zerpe (flickr)

Raw Data

Datatype Approximate Size Download Size
Bases Coverage
10x140.57 Gbp168.30x81.514 GB
Arima136.84 Gbp163.83x84.273 GB
Bionano1286.04 Gbp1539.69x1.851 GB
PacBio SubReads49.41 Gbp59.16x85.729 GB
Coverage based on genome size 0.84 Gbp.
Last upload on 1 May 2019.
Download each datatype using the AWS Command Line Interface:
aws s3 --no-sign-request sync s3://genomeark/species/Myripristis_murdjan/fMyrMur1/genomic_data/10x/ .
aws s3 --no-sign-request sync s3://genomeark/species/Myripristis_murdjan/fMyrMur1/genomic_data/arima/ .
aws s3 --no-sign-request sync s3://genomeark/species/Myripristis_murdjan/fMyrMur1/genomic_data/bionano/ .
aws s3 --no-sign-request sync s3://genomeark/species/Myripristis_murdjan/fMyrMur1/genomic_data/pacbio/ . --exclude "*ccs*bam*"

Assemblies

Individual 1 Primary Assembly
Version assembly_curated from 21 June 2019
fMyrMur1.pri.cur.20190621.fasta.gz (242 MB)

Contigs Scaffolds
NG LG Len LG Len
10 2 27.28 Mbp 1 42.40 Mbp
20 6 24.31 Mbp 3 39.21 Mbp
30 9 20.03 Mbp 6 36.53 Mbp
40 14 17.27 Mbp 8 35.81 Mbp
50 19 14.48 Mbp 10 34.95 Mbp
60 27 8.34 Mbp 13 33.92 Mbp
70 39 5.79 Mbp 15 33.42 Mbp
80 57 3.78 Mbp 18 31.82 Mbp
90 89 1.76 Mbp 20 29.23 Mbp
100 339 862 bp 86 862 bp
1.000x 340 0.83 Gbp 87 0.84 Gbp
NG based on genome size 0.84 Gbp.
Individual 1 Alternate Assembly
Version assembly_curated from 21 June 2019
fMyrMur1.alt.cur.20190621.fasta.gz (238 MB)

Contigs Scaffolds
NG LG Len LG Len
10 28 2.17 Mbp 28 2.19 Mbp
20 75 1.38 Mbp 74 1.39 Mbp
30 144 1.03 Mbp 143 1.03 Mbp
40 236 0.79 Mbp 235 0.79 Mbp
50 353 0.61 Mbp 352 0.61 Mbp
60 506 0.49 Mbp 505 0.49 Mbp
70 691 0.39 Mbp 690 0.39 Mbp
80 930 0.29 Mbp 929 0.29 Mbp
90 1284 0.18 Mbp 1282 0.18 Mbp
100 2198 481 bp 2192 810 bp
1.000x 2199 0.82 Gbp 2193 0.82 Gbp
NG based on genome size 0.84 Gbp.

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