Ornithorhynchus anatinus

platypus


Information

CC BY-NC 2.0 Trevira1 (flickr)

Raw Data

Datatype Approximate Coverage Download Size
10x168.32x166.575 GB
Bionano672.40x1.882 GB
Dovetail Genomics20.96x26.721 GB
PacBio ScrapsN/A563.585 GB
PacBio SubReads65.20x499.736 GB
Phase Genomics49.37x61.153 GB
Coverage based on genome size 2.13 Gbp.
Last upload on 7 September 2018.
Download each datatype using the AWS Command Line Interface:

Assemblies

Individual 1 Primary Assembly
Version assembly_curated from 16 November 2018
mOrnAna1.pri.cur.20181116.fasta.gz (489 MB)

Contigs Scaffolds
NG LG Len LG Len
10 4 36.85 Mbp 1 171.72 Mbp
20 10 28.05 Mbp 2 141.99 Mbp
30 19 20.74 Mbp 4 125.04 Mbp
40 31 16.13 Mbp 5 110.29 Mbp
50 45 12.42 Mbp 8 70.14 Mbp
60 66 8.63 Mbp 11 60.46 Mbp
70 101 4.73 Mbp 15 46.40 Mbp
80 174 1.69 Mbp 21 30.54 Mbp
90 - - - -
100 - - - -
0.866x 826 1.84 Gbp 304 1.86 Gbp
Individual 1 Alternate Assembly
Version assembly_curated from 16 November 2018
mOrnAna1.alt.cur.20181116.fasta.gz (457 MB)

Contigs Scaffolds
NG LG Len LG Len
10 74 2.15 Mbp 74 2.15 Mbp
20 192 1.56 Mbp 192 1.56 Mbp
30 358 1.11 Mbp 358 1.11 Mbp
40 584 0.81 Mbp 584 0.81 Mbp
50 899 0.56 Mbp 899 0.56 Mbp
60 1401 0.31 Mbp 1400 0.31 Mbp
70 2908 53.49 Kbp 2886 53.74 Kbp
80 - - - -
90 - - - -
100 - - - -
0.741x 5878 1.58 Gbp 5850 1.58 Gbp
NG based on genome size 2.13 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_mt_milan from 2 March 2019
mOrnAna1.MT.20190302.fasta.gz (5 KB)

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.