Ornithorhynchus anatinus

platypus


Information

Resource
NCBI Taxonomy Browser NCBI:txid9258

Resource Primary Assembly Alternate Assembly
GenBank GCA_004115215.4 GCA_004115175.2
ENA GCA_004115215.4 GCA_004115175.2
UCSC Genome Browser GCA_004115215.4 GCA_004115175.2

CC BY-NC 2.0 Trevira1 (flickr)

Raw Data

Datatype Approximate Size Download Size
Bases Coverage
10x358.22 Gbp168.32x166.575 GB
Bionano1431.02 Gbp672.40x1.882 GB
Dovetail Genomics44.61 Gbp20.96x26.721 GB
PacBio SubReads138.76 Gbp65.20x499.736 GB
Phase Genomics105.08 Gbp49.37x61.153 GB
Coverage based on genome size 2.13 Gbp.
Last upload on 7 September 2018.
Download each datatype using the AWS Command Line Interface:

Assemblies

Individual 1 Primary Assembly
Version assembly_curated from 6 December 2019
mOrnAna1.pri.cur.20191206.fasta.gz (530 MB)

Contigs Scaffolds
NG LG Len LG Len
10 4 36.85 Mbp 1 171.72 Mbp
20 10 28.05 Mbp 2 141.99 Mbp
30 19 20.74 Mbp 4 125.04 Mbp
40 31 16.13 Mbp 5 110.29 Mbp
50 45 12.42 Mbp 8 70.14 Mbp
60 66 8.63 Mbp 11 60.46 Mbp
70 101 4.73 Mbp 15 46.40 Mbp
80 174 1.69 Mbp 21 30.54 Mbp
90 - - - -
100 - - - -
0.866x 836 1.84 Gbp 321 1.86 Gbp
NG based on genome size 2.13 Gbp.
Individual 1 Alternate Assembly
Version assembly_curated from 6 December 2019
mOrnAna1.alt.cur.20191206.fasta.gz (458 MB)

Contigs Scaffolds
NG LG Len LG Len
10 74 2.15 Mbp 74 2.15 Mbp
20 192 1.56 Mbp 192 1.56 Mbp
30 358 1.11 Mbp 358 1.11 Mbp
40 584 0.81 Mbp 584 0.81 Mbp
50 899 0.56 Mbp 899 0.56 Mbp
60 1401 0.31 Mbp 1400 0.31 Mbp
70 2912 53.05 Kbp 2894 53.46 Kbp
80 - - - -
90 - - - -
100 - - - -
0.740x 5868 1.58 Gbp 5843 1.58 Gbp
NG based on genome size 2.13 Gbp.

Individual 1 Mitochondrial Assembly
Version assembly_curated from 16 November 2018
mOrnAna1.pri.cur.20181116.MT.fasta.gz (5 KB)

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.