Petromyzon marinus

sea lamprey


Information

NCBI Taxonomy Browser
CC BY-SA 2.0 T. Lawrence (flickr)

Raw Data

Datatype Approximate Coverage Download Size
10x67.01x50.509 GB
Arima71.23x56.763 GB
Bionano538.18x0.838 GB
PacBio SubReads62.36x159.414 GB
Coverage based on genome size 1.50 Gbp.
Last upload on 28 May 2019.
Download each datatype using the AWS Command Line Interface:

Assemblies


Individual 1 Primary Assembly
Version assembly_vgp_standard_1.6 from 17 August 2019
kPetMar1.pri.asm.20190817.fasta.gz (286 MB)

Contigs Scaffolds
NG LG Len LG Len
10 13 8.81 Mbp 6 16.78 Mbp
20 36 5.48 Mbp 16 14.04 Mbp
30 70 3.56 Mbp 27 12.97 Mbp
40 127 2.07 Mbp 40 10.35 Mbp
50 234 0.97 Mbp 62 4.09 Mbp
60 484 0.38 Mbp 133 1.09 Mbp
70 1406 64.00 Kbp 442 0.23 Mbp
80 - - - -
90 - - - -
100 - - - -
0.719x 2385 1.08 Gbp 1652 1.13 Gbp
Individual 1 Alternate Assembly
Version assembly_vgp_standard_1.6 from 17 August 2019
kPetMar1.alt.asm.20190817.fasta.gz (227 MB)

Contigs Scaffolds
NG LG Len LG Len
10 127 0.86 Mbp 127 0.86 Mbp
20 351 0.54 Mbp 351 0.54 Mbp
30 688 0.37 Mbp 688 0.37 Mbp
40 1217 0.21 Mbp 1217 0.21 Mbp
50 2277 92.69 Kbp 2277 92.69 Kbp
60 - - - -
70 - - - -
80 - - - -
90 - - - -
100 - - - -
0.559x 4041 0.84 Gbp 4041 0.84 Gbp
NG based on genome size 1.50 Gbp.

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.