Pterocles gutturalis

yellow-throated sandgrouse


Information

NCBI Taxonomy Browser
CC BY-SA 3.0 Yathin S Krishnappa (wikimedia)

Raw Data

Datatype Approximate Coverage Download Size
10x155.20x85.135 GB
Arima189.85x103.934 GB
Bionano167.74x0.298 GB
PacBio ScrapsN/A119.637 GB
PacBio SubReads70.94x130.736 GB
Coverage based on genome size 1.07 Gbp.
Last upload on 15 August 2019.
Download each datatype using the AWS Command Line Interface:

Assemblies


Individual 1 Primary Assembly
Version assembly_vgp_standard_1.5 from 10 August 2019
bPteGut1.pri.asm.20190810.fasta.gz (332 MB)

Contigs Scaffolds
NG LG Len LG Len
10 5 16.45 Mbp 0 132.71 Mbp
20 12 15.57 Mbp 2 42.23 Mbp
30 19 15.11 Mbp 5 36.14 Mbp
40 26 14.43 Mbp 9 25.00 Mbp
50 34 12.22 Mbp 13 21.72 Mbp
60 43 10.34 Mbp 19 16.63 Mbp
70 55 7.79 Mbp 26 15.02 Mbp
80 71 5.81 Mbp 33 12.13 Mbp
90 95 3.50 Mbp 44 7.80 Mbp
100 145 1.22 Mbp 69 2.43 Mbp
1.050x 329 1.12 Gbp 183 1.13 Gbp
Individual 1 Alternate Assembly
Version assembly_vgp_standard_1.5 from 10 August 2019
bPteGut1.alt.asm.20190810.fasta.gz (308 MB)

Contigs Scaffolds
NG LG Len LG Len
10 24 3.31 Mbp 24 3.31 Mbp
20 63 2.38 Mbp 63 2.38 Mbp
30 113 1.91 Mbp 113 1.91 Mbp
40 176 1.50 Mbp 176 1.50 Mbp
50 261 1.09 Mbp 261 1.09 Mbp
60 374 0.83 Mbp 374 0.83 Mbp
70 523 0.62 Mbp 523 0.62 Mbp
80 731 0.42 Mbp 731 0.42 Mbp
90 1087 0.20 Mbp 1087 0.20 Mbp
100 - - - -
0.970x 1958 1.04 Gbp 1958 1.04 Gbp
NG based on genome size 1.07 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 21 August 2019
bPteGut1.MT.20190821.fasta.gz (6 KB)

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.