Rhinolophus ferrumequinum

greater horseshoe bat


Information

Resource
NCBI Taxonomy Browser NCBI:txid59479

Resource Primary Assembly Alternate Assembly
GenBank GCA_014108255.1
ENA GCA_014108255.1
UCSC Genome Browser GCA_014108255.1

CC BY-NC-SA 2.0 Ján Svetlík (flickr)

Raw Data

Datatype Approximate Size Download Size
Bases Coverage
10x107.25 Gbp45.26x64.099 GB
Bionano1592.93 Gbp672.14x2.220 GB
PacBio SubReads152.47 Gbp64.34x271.143 GB
Phase Genomics45.16 Gbp19.06x28.046 GB
Coverage based on genome size 2.37 Gbp.
Last upload on 3 April 2018.
Download each datatype using the AWS Command Line Interface:

Assemblies

Individual 1 Primary Assembly
Version assembly_curated from 7 September 2018
mRhiFer1.pri.cur.20180907.fasta.gz (607 MB)

Contigs Scaffolds
NG LG Len LG Len
10 3 59.75 Mbp 2 106.21 Mbp
20 7 51.12 Mbp 4 101.15 Mbp
30 12 40.32 Mbp 6 97.57 Mbp
40 19 32.48 Mbp 9 89.12 Mbp
50 27 25.18 Mbp 11 83.96 Mbp
60 39 16.72 Mbp 15 66.94 Mbp
70 56 10.68 Mbp 19 55.57 Mbp
80 85 5.27 Mbp 23 44.82 Mbp
90 - - - -
100 - - - -
0.873x 292 2.07 Gbp 134 2.08 Gbp
NG based on genome size 2.37 Gbp.
Individual 1 Alternate Assembly
Version assembly_curated from 7 September 2018
mRhiFer1.alt.cur.20180907.fasta.gz (453 MB)

Contigs Scaffolds
NG LG Len LG Len
10 242 0.71 Mbp 242 0.71 Mbp
20 648 0.48 Mbp 648 0.48 Mbp
30 1250 0.33 Mbp 1250 0.33 Mbp
40 2162 0.20 Mbp 2162 0.20 Mbp
50 3838 90.10 Kbp 3838 90.18 Kbp
60 9121 29.05 Kbp 9119 29.05 Kbp
70 - - - -
80 - - - -
90 - - - -
100 - - - -
0.639x 13426 1.51 Gbp 13424 1.51 Gbp
NG based on genome size 2.37 Gbp.

Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 3 October 2019
mRhiFer1.MT.20191003.fasta.gz (5 KB)

Data Use Policy

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