Rousettus aegyptiacus

Egyptian fruit bat

Information

Resource
NCBI Taxonomy Browser	NCBI:txid9407

Resource	Primary Assembly	Alternate Assembly
GenBank	GCA_014176215.1
ENA	GCA_014176215.1
UCSC Genome Browser	GCA_014176215.1

CC BY-SA 3.0 Вых Пыхманн (wikimedia)

Raw Data

Datatype	Approximate Size		Download Size
Datatype	Bases	Coverage	Download Size
10x	112.49 Gbp	53.31x	56.105 GB
Arima	22.85 Gbp	10.83x	14.790 GB
Bionano	1531.71 Gbp	725.93x	1.033 GB
PacBio SubReads	122.36 Gbp	57.99x	217.105 GB

Coverage based on genome size 2.11 Gbp.

Last upload on 23 February 2020.

Download each datatype using the AWS Command Line Interface:

aws s3 --no-sign-request sync s3://genomeark/species/Rousettus_aegyptiacus/mRouAeg1/genomic_data/10x/ .
aws s3 --no-sign-request sync s3://genomeark/species/Rousettus_aegyptiacus/mRouAeg1/genomic_data/arima/ .
aws s3 --no-sign-request sync s3://genomeark/species/Rousettus_aegyptiacus/mRouAeg1/genomic_data/bionano/ .
aws s3 --no-sign-request sync s3://genomeark/species/Rousettus_aegyptiacus/mRouAeg1/genomic_data/pacbio/ . --exclude "*ccs*bam*"

Assemblies

Individual 1 Primary Assembly
Version assembly_dresden_DAmar1.0 from 27 April 2019
mRouAeg1.pri.asm.20190427.fasta.gz (599 MB)

	Contigs		Scaffolds
NG	LG	Len	LG	Len
10	2	59.73 Mbp	1	177.60 Mbp
20	7	41.71 Mbp	2	173.79 Mbp
30	12	31.55 Mbp	3	160.59 Mbp
40	20	24.21 Mbp	5	115.50 Mbp
50	30	18.63 Mbp	7	112.74 Mbp
60	43	13.65 Mbp	8	106.50 Mbp
70	63	8.03 Mbp	11	94.23 Mbp
80	100	4.03 Mbp	13	61.85 Mbp
90	-	-	-	-
100	-	-	-	-
0.885x	271	1.87 Gbp	29	1.89 Gbp

NG based on genome size 2.11 Gbp.

Individual 1 Alternate Assembly
No alternate assembly available.

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.