Salmo trutta

brown trout


Information

Resource
NCBI Taxonomy Browser NCBI:txid8032

public domain

Raw Data

Datatype Approximate Size Download Size
Bases Coverage
10x212.90 Gbp89.76x142.574 GB
Arima144.52 Gbp60.93x71.159 GB
Bionano494.43 Gbp208.46x0.592 GB
PacBio SubReads163.01 Gbp68.73x286.601 GB
PacBio HiFi32.15 Gbp13.55x21.885 GB
Coverage based on genome size 2.37 Gbp.
Last upload on 26 April 2019.
Download each datatype using the AWS Command Line Interface:

Assemblies

Individual 1 Primary Assembly
Version assembly_curated from 3 April 2019
fSalTru1.pri.cur.20190403.fasta.gz (624 MB)

Contigs Scaffolds
NG LG Len LG Len
10 22 7.53 Mbp 2 86.25 Mbp
20 59 5.36 Mbp 5 74.75 Mbp
30 112 3.65 Mbp 8 66.90 Mbp
40 186 2.66 Mbp 12 59.76 Mbp
50 294 1.69 Mbp 17 52.21 Mbp
60 464 1.07 Mbp 21 49.36 Mbp
70 740 0.65 Mbp 26 46.38 Mbp
80 1197 0.38 Mbp 31 44.89 Mbp
90 2068 0.18 Mbp 38 25.48 Mbp
100 5380 1 bp 1439 6.00 Kbp
1.000x 5381 2.30 Gbp 1440 2.37 Gbp
Individual 1 Alternate Assembly
No alternate assembly available.

NG based on genome size 2.37 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 3 October 2019
fSalTru1.MT.20191003.fasta.gz (5 KB)

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.