Salmo trutta

brown trout

Resources

Data: s3://genomeark/species/Salmo_trutta
GenBank: Not available.

Raw Data

Link: s3://genomeark/species/Salmo_trutta
Last upload: 26 September 2018

Datatype Approximate Coverage Download Size
10xN/A142.574 GB
ArimaN/A71.159 GB
BionanoN/A0.592 GB
PacBio ScrapsN/A586.131 GB
PacBio SubReadsN/A286.601 GB

No genome size estimate available.

Assemblies

Primary

Version: assembly_cambridge
Date: 16 October 2018
Link: fSalTru1.pri.asm.20181016.fasta.gz (0.620 GB)

Contigs Scaffolds
NG LG Len LG Len
10 22 7.53 Mbp 2 90.35 Mbp
20 59 5.36 Mbp 5 70.19 Mbp
30 112 3.65 Mbp 9 59.09 Mbp
40 186 2.66 Mbp 13 54.30 Mbp
50 294 1.69 Mbp 17 52.21 Mbp
60 464 1.07 Mbp 22 48.03 Mbp
70 740 0.65 Mbp 27 42.50 Mbp
80 1198 0.38 Mbp 33 41.60 Mbp
90 2069 0.18 Mbp 55 3.44 Mbp
100 10361 1 bp 1513 60 bp
1.000x 10362 2.30 Gbp 1514 2.38 Gbp

Alternate

Version: assembly_cambridge
Date: 16 October 2018
Link: fSalTru1.alt.asm.20181016.fasta.gz (0.053 GB)

Contigs Scaffolds
NG LG Len LG Len
10 184 82.68 Kbp 184 82.68 Kbp
20 434 70.31 Kbp 434 70.31 Kbp
30 720 63.17 Kbp 720 63.17 Kbp
40 1035 57.51 Kbp 1035 57.51 Kbp
50 1379 53.13 Kbp 1379 53.13 Kbp
60 1751 48.87 Kbp 1751 48.87 Kbp
70 2161 43.87 Kbp 2161 43.87 Kbp
80 2624 37.88 Kbp 2624 37.88 Kbp
90 3183 29.83 Kbp 3183 29.83 Kbp
100 4193 164 bp 4193 164 bp
1.000x 4194 189.98 Mbp 4194 189.98 Mbp

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