Sylvia borin

garden warbler


Information

Resource
NCBI Taxonomy Browser NCBI:txid1471886

Resource Primary Assembly Alternate Assembly
GenBank GCA_014839755.1 GCA_014839765.1
ENA GCA_014839755.1 GCA_014839765.1
UCSC Genome Browser GCA_014839755.1 GCA_014839765.1

CC BY-NC-SA 2.0 Steve Garvie (flickr)

Raw Data

Datatype Approximate Size Download Size
Bases Coverage
10x105.80 Gbp88.16x55.199 GB
Arima98.56 Gbp82.13x57.616 GB
Bionano707.61 Gbp589.67x1.193 GB
PacBio SubReads86.49 Gbp72.07x145.685 GB
Coverage based on genome size 1.20 Gbp.
Last upload on 28 January 2020.
Download each datatype using the AWS Command Line Interface:

Assemblies

Individual 1 Primary Assembly
Version assembly_curated from 24 April 2020
bSylBor1.pri.cur.20200424.fasta.gz (303 MB)

Contigs Scaffolds
NG LG Len LG Len
10 1 61.36 Mbp 0 153.15 Mbp
20 3 56.36 Mbp 1 115.67 Mbp
30 5 52.70 Mbp 2 113.69 Mbp
40 7 51.92 Mbp 4 72.75 Mbp
50 11 28.09 Mbp 5 72.29 Mbp
60 17 17.89 Mbp 8 36.31 Mbp
70 25 11.09 Mbp 12 20.97 Mbp
80 45 3.87 Mbp 20 11.14 Mbp
90 - - - -
100 - - - -
0.870x 310 1.04 Gbp 176 1.05 Gbp
NG based on genome size 1.20 Gbp.
Individual 1 Alternate Assembly
Version assembly_curated from 24 April 2020
bSylBor1.alt.cur.20200424.fasta.gz (301 MB)

Contigs Scaffolds
NG LG Len LG Len
10 7 12.55 Mbp 7 12.55 Mbp
20 17 9.60 Mbp 17 9.60 Mbp
30 32 7.10 Mbp 32 7.10 Mbp
40 53 5.09 Mbp 53 5.09 Mbp
50 82 3.36 Mbp 82 3.36 Mbp
60 126 2.20 Mbp 126 2.20 Mbp
70 201 1.20 Mbp 201 1.20 Mbp
80 349 0.54 Mbp 349 0.54 Mbp
90 - - - -
100 - - - -
0.861x 775 1.03 Gbp 775 1.03 Gbp
NG based on genome size 1.20 Gbp.

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.