Taeniopygia guttata

zebra finch

Resources

Data: s3://genomeark/species/Taeniopygia_guttata
GenBank: Not available.

Raw Data

Link: s3://genomeark/species/Taeniopygia_guttata
Last upload: 17 July 2018

Datatype Approximate Coverage Download Size
10x198.60x123.768 GB
Arima242.54x126.558 GB
Bionano1586.04x2.136 GB
Illumina134.05x71.694 GB
PacBio ScrapsN/A480.991 GB
PacBio SubReads154.35x574.778 GB

Coverage based on genome size 1.04 Gbp.

Assemblies

Primary

Version: assembly_curated
Date: 23 October 2018
Link: bTaeGut1.pri.cur.20181023.fasta.gz (0.276 GB)

Contigs Scaffolds
NG LG Len LG Len
10 1 45.19 Mbp 0 150.69 Mbp
20 4 31.80 Mbp 1 114.56 Mbp
30 8 20.11 Mbp 2 113.23 Mbp
40 13 17.57 Mbp 3 75.46 Mbp
50 20 12.08 Mbp 4 71.55 Mbp
60 30 9.21 Mbp 6 62.01 Mbp
70 43 6.91 Mbp 8 35.67 Mbp
80 63 4.17 Mbp 12 21.01 Mbp
90 97 2.05 Mbp 18 14.33 Mbp
100 217 0.25 Mbp 33 2.91 Mbp
1.019x 446 1.06 Gbp 134 1.06 Gbp

Alternate

Version: assembly_curated
Date: 23 October 2018
Link: bTaeGut1.alt.cur.20181023.fasta.gz (0.276 GB)

Contigs Scaffolds
NG LG Len LG Len
10 5 13.57 Mbp 5 13.57 Mbp
20 16 7.61 Mbp 16 7.61 Mbp
30 32 5.49 Mbp 32 5.49 Mbp
40 55 3.92 Mbp 55 3.92 Mbp
50 87 2.52 Mbp 87 2.52 Mbp
60 141 1.51 Mbp 141 1.51 Mbp
70 231 0.83 Mbp 229 0.84 Mbp
80 546 0.11 Mbp 526 0.11 Mbp
90 3209 23.84 Kbp 3160 23.95 Kbp
100 - - - -
0.932x 5381 0.97 Gbp 5336 0.97 Gbp

Primary

Version: assembly_curated
Date: 19 October 2018
Link: bTaeGut2.pri.cur.20181019.fasta.gz (0.307 GB)

Contigs Scaffolds
NG LG Len LG Len
10 5 14.25 Mbp 0 151.57 Mbp
20 13 10.60 Mbp 1 116.14 Mbp
30 25 7.66 Mbp 2 112.22 Mbp
40 41 5.45 Mbp 3 79.54 Mbp
50 63 4.13 Mbp 4 73.51 Mbp
60 91 3.16 Mbp 6 63.90 Mbp
70 130 2.24 Mbp 8 37.41 Mbp
80 188 1.41 Mbp 12 21.11 Mbp
90 284 0.82 Mbp 17 16.67 Mbp
100 547 0.18 Mbp 26 6.73 Mbp
1.047x 1331 1.08 Gbp 540 1.11 Gbp

Alternate

Version: assembly_curated
Date: 19 October 2018
Link: bTaeGut2.alt.cur.20181019.fasta.gz (0.272 GB)

Contigs Scaffolds
NG LG Len LG Len
10 20 3.55 Mbp 20 3.55 Mbp
20 57 2.35 Mbp 57 2.35 Mbp
30 111 1.61 Mbp 111 1.61 Mbp
40 186 1.22 Mbp 186 1.22 Mbp
50 285 0.89 Mbp 285 0.89 Mbp
60 424 0.62 Mbp 423 0.63 Mbp
70 642 0.37 Mbp 638 0.37 Mbp
80 1089 0.13 Mbp 1077 0.13 Mbp
90 3487 21.03 Kbp 3466 21.14 Kbp
100 - - - -
0.915x 4693 0.95 Gbp 4677 0.95 Gbp

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.