Zalophus californianus

California sea lion


Information

Resource
NCBI Taxonomy Browser NCBI:txid9704

Resource Primary Assembly Alternate Assembly
GenBank GCA_009762305.2 GCA_009762295.2
ENA GCA_009762305.2 GCA_009762295.2
UCSC Genome Browser GCA_009762305.2 GCA_009762295.2

CC BY-SA 2.0 Gregory Smith (flickr)

Raw Data

Datatype Approximate Size Download Size
Bases Coverage
10x193.97 Gbp61.58x94.215 GB
Arima206.11 Gbp65.43x124.347 GB
Bionano407.95 Gbp129.51x0.820 GB
PacBio SubReads253.60 Gbp80.51x449.022 GB
Coverage based on genome size 3.15 Gbp.
Last upload on 5 September 2019.
Download each datatype using the AWS Command Line Interface:

Assemblies

Individual 1 Primary Assembly
Version assembly_curated from 13 March 2020
mZalCal1.pri.cur.20200313.fasta.gz (698 MB)

Contigs Scaffolds
NG LG Len LG Len
10 3 70.85 Mbp 1 203.41 Mbp
20 9 48.36 Mbp 3 191.60 Mbp
30 16 40.52 Mbp 4 154.43 Mbp
40 25 30.66 Mbp 7 140.58 Mbp
50 36 24.59 Mbp 9 129.41 Mbp
60 53 14.65 Mbp 11 113.59 Mbp
70 83 7.13 Mbp 15 89.16 Mbp
80 - - - -
90 - - - -
100 - - - -
0.759x 231 2.39 Gbp 46 2.41 Gbp
NG based on genome size 3.15 Gbp.
Individual 1 Alternate Assembly
Version assembly_curated from 13 March 2020
mZalCal1.alt.cur.20200313.fasta.gz (578 MB)

Contigs Scaffolds
NG LG Len LG Len
10 81 2.88 Mbp 81 2.88 Mbp
20 215 1.99 Mbp 215 1.99 Mbp
30 406 1.39 Mbp 406 1.39 Mbp
40 680 0.97 Mbp 680 0.97 Mbp
50 1089 0.60 Mbp 1089 0.60 Mbp
60 2055 0.15 Mbp 2055 0.15 Mbp
70 - - - -
80 - - - -
90 - - - -
100 - - - -
0.626x 3096 1.97 Gbp 3096 1.97 Gbp
NG based on genome size 3.15 Gbp.

Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 4 October 2019
mZalCal1.MT.20191004.fasta.gz (5 KB)

Data Use Policy

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