Zalophus californianus

California sea lion


Information

NCBI Taxonomy Browser
CC BY-SA 2.0 Gregory Smith (flickr)

Raw Data

Datatype Approximate Coverage Download Size
10x61.58x94.215 GB
Arima65.43x124.347 GB
Bionano129.51x0.820 GB
PacBio SubReads80.51x449.022 GB
Coverage based on genome size 3.15 Gbp.
Last upload on 5 September 2019.
Download each datatype using the AWS Command Line Interface:

Assemblies


Individual 1 Primary Assembly
Version assembly_vgp_standard_1.6 from 19 September 2019
mZalCal1.pri.asm.20190919.fasta.gz (706 MB)

Contigs Scaffolds
NG LG Len LG Len
10 2 109.54 Mbp 1 203.41 Mbp
20 6 84.90 Mbp 3 191.60 Mbp
30 10 68.03 Mbp 4 148.10 Mbp
40 15 59.91 Mbp 7 140.58 Mbp
50 20 47.97 Mbp 9 116.09 Mbp
60 30 27.30 Mbp 12 107.19 Mbp
70 46 12.37 Mbp 15 89.16 Mbp
80 - - - -
90 - - - -
100 - - - -
0.759x 165 2.39 Gbp 60 2.41 Gbp
Individual 1 Alternate Assembly
Version assembly_vgp_standard_1.6 from 19 September 2019
mZalCal1.alt.asm.20190919.fasta.gz (585 MB)

Contigs Scaffolds
NG LG Len LG Len
10 81 2.88 Mbp 81 2.88 Mbp
20 215 1.99 Mbp 215 1.99 Mbp
30 406 1.39 Mbp 406 1.39 Mbp
40 680 0.97 Mbp 680 0.97 Mbp
50 1089 0.60 Mbp 1089 0.60 Mbp
60 2055 0.15 Mbp 2055 0.15 Mbp
70 - - - -
80 - - - -
90 - - - -
100 - - - -
0.626x 3094 1.97 Gbp 3094 1.97 Gbp
NG based on genome size 3.15 Gbp.
Individual 1 Mitochondrial Assembly
Version assembly_MT_rockefeller from 4 October 2019
mZalCal1.MT.20191004.fasta.gz (5 KB)

Data Use Policy

VGP samples and data come from a variety of sources. To support fair and productive use of this data, please abide by the Data Use Policy and contact us with any questions.